YALI0D18194g

Overview

Description weakly similar to uniprot|Q8W1E7 Arabidopsis thaliana AT4g15420/dl3755w (ubiquitin fusion degradation protein UFD1 like protein)
Locus type CDS
Locus tag YALI0D18194g

Location

Species Yarrowia lipolytica Positions 2275976..2277866
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1891 (nuc.)
Previous locus YALI0D18150g Next locus YALI0D18216g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18194g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18194gYALI0D18194g_mRNA-001YALI0D18194g_CDS-001

Nucleotide sequence

 

>YALI0D18194g
ATGAAACTCGTTGCATACACTTGGGCTAACAAATACAGCGACAAAATCACTCTGCCAGCG
GACGTTCTGGACTCCCTAGTGGCGGAGTTTGGAGATGAACTGCCTCGCCCACTGCTCTTC
ACAATCAAAGCACGTGATCCAAAGAACCCACGTGACTCGCACTTGACTACGGTCGGAGTC
AAGGAATTCACTGCCGAATCGGGAACGGTCGGAGTGCCACAGATCGTCCTGGAGAACATC
AGGACGGAAACAGGAGCCATCCTCGATGTGACCGTATCACGTGACATCCCGCTTGCTACC
GACATGACTCTCAAGCCCCGTGATCAATACCAGGTCGACAACTACGAGGCTCTGCTCGAG
GCTGCATTAAGGGCAAGTTACACTGCGCTGACAGTCGGTCAGAACATTGTGATCAGGAAT
CCTTCTGATGCGTCGCGTGATCTTGAGTTTGTGGTAGAAAGCCTCTCTCCCGCGTCTACT
GTTTGCATTGTTGATACTGACGTTAATCTGGATGTCCTGGTCCCTGTGGGAGTGGACAAT
GGCCAGATTGCTAGTGCTGGGTCTTACAAGACTCGTGATACTGCTGCGGATCTCGCAAGT
CTAGACTTTAGCACCATCACTTCGCTGCCATTTTCATCTGGGCCATCCAAGCACAGGATT
TCTCTTGAGAAATTCCCCCACATTACCATTGCTTCTTTCAGAGCTTTCATTGGCATCTCT
CAGGACACTTGTCCGTCCAGTTTCATCTGGTCGACATTGGACGGTTCGGTGGACATTCAA
GCGAGCAATCCTTTCGGCCAGGAGCTGTACATATGGAGCGAAGATGAGCTCAAGATAGAG
AATCATGCAATTGAAATCGAAGATGGTGATCATGAAATGGCAGATGGTGCCCCTGCCAAT
TCAACCAAGTGTCCCACTTGTAACAATTACATTCCCGACCAAAGTTACACTCTGCATTCC
AACTTTTGCGCCAGAAACAACATTCCTTGCGACCAGTTTGACGTCTGTGGTCATGTGTTT
AAGAGAGGAGAGCCACGCGAGTCTCATTGGCACTGTCAGTCGTGTGACAAGTTTGGAGAC
GGTTCTGACGCTCACGACACTCATGTTCACTACTCTCATACTACGCCGCAGCCCTGTGCT
TGTGGCTTTCAAGCCTCTAACCACATCACTCTCGCCCTCCACAGCCACACTGAGTGTCCG
CTGACGCTTCATGAGTGTCGATTCTGCCATCTTCGAGTCCCGCGTGACGTGGCTTCTCCC
CGTGACTTGATTTCGGGATACTCAGGCCATGAGAGTGCCTGTGGAGCCAAAACCACCGAC
TGTCACGTGTGCAAGAAGCCTGTGCGTCTGAGAGACTTGTTGAGTCACCAGAAGCTGCAC
ACGCTGGCTACTCGTGACAAGATTGCTCCAGAGCTTTGCTCCAATACTCTCTGCATTCGA
GGTCGAGGCAACAATGCGCTTGAGCTCTGTGACACCTGTTTCGGACCTCTCTATTCGTCT
GTCAACGACCCCACGGGTTCTCGACTCAAGTCTCGTGTTGAAAGACGTTATGTGATTCAG
CTGACCAAGGGATGCGGTAAAAGCAGTTGCAGAAACTCATATTGTGTTTCTTCCGGGCTG
CTTGCCAAACCCACCATGGCCCAGGTGATGGGTCTTATCAAGGAGATTCCAGCTCCCAGT
TTCTGCGTCGACGAGAAGACCACCAAGCGCAAGAACTTTGTCGACTTCCAGGCTGAGAAC
TCGCATTATTCCCGAGAGTGGCTGTCTGTGGCCATTGAGGAGAACAAGGGCAACGAGCAA
GAGGCCGTGAAGTGGTTGGAGTACAATGCTCCAAAGGAGATCACTGTATAGTATCATACA
CTAATAGCACAAATATAGACAACTTGGAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18194g_CDS-001

Protein length: 617 aa.
Product: Conserved hypothetical protein

>YALI0D18194g_CDS-001 MKLVAYTWANKYSDKITLPADVLDSLVAEFGDELPRPLLFTIKARDPKNPRDSHLTTVGV
KEFTAESGTVGVPQIVLENIRTETGAILDVTVSRDIPLATDMTLKPRDQYQVDNYEALLE
AALRASYTALTVGQNIVIRNPSDASRDLEFVVESLSPASTVCIVDTDVNLDVLVPVGVDN
GQIASAGSYKTRDTAADLASLDFSTITSLPFSSGPSKHRISLEKFPHITIASFRAFIGIS
QDTCPSSFIWSTLDGSVDIQASNPFGQELYIWSEDELKIENHAIEIEDGDHEMADGAPAN
STKCPTCNNYIPDQSYTLHSNFCARNNIPCDQFDVCGHVFKRGEPRESHWHCQSCDKFGD
GSDAHDTHVHYSHTTPQPCACGFQASNHITLALHSHTECPLTLHECRFCHLRVPRDVASP
RDLISGYSGHESACGAKTTDCHVCKKPVRLRDLLSHQKLHTLATRDKIAPELCSNTLCIR
GRGNNALELCDTCFGPLYSSVNDPTGSRLKSRVERRYVIQLTKGCGKSSCRNSYCVSSGL
LAKPTMAQVMGLIKEIPAPSFCVDEKTTKRKNFVDFQAENSHYSREWLSVAIEENKGNEQ
EAVKWLEYNAPKEITV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG