YALI0D17798g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D17798g

Location

Species Yarrowia lipolytica Positions 2197955..2198710
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 756 (nuc.)
Previous locus YALI0D17776g Next locus YALI0D17820g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17798g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17798gYALI0D17798g_mRNA-001YALI0D17798g_CDS-001

Nucleotide sequence

 

>YALI0D17798g
ATGGACAGACTCATGAAGGCCAAGGCTAGACACACGTCGACGTGTGCCGGCAGCGAAAAA
CCCAACCAGCGACTGTCGACATCAACCCACTCATCTCTCAACTCACAGTTTTCCTATAAC
AGCTATCCCGAGTCCACCTACAGCGCCCAGAGCGGTGGCGTTTCTCCCACCTCCCAAAAA
CCAATGGTGGTTCTAGGTGACTCTCTCATTGTGGAGAAGAAGCTGGACTCCGCCACAGCT
ACCTCCACAACCACCCCCTCCTCTCACAACACCGACTCGGTCGCAGACATCTACGACAGC
TATGCGGACAACAAGCGTCTGTCTATGGGCTCCTTCTCGTCGTCGGGATCGGACTTGTCG
GACCTCAGCAACGACTTCCTGCTGCAGGCCATCAAGGACTCGACGACCGGCGCCACCGGC
GCCATCAAAATGGACTTCCACCAGAGCCACCAGGGCCACAGACAGACCGCAGACCAGTCG
GAAAAGTTCCAGGGTCTGGGCTACCAGACCGAAATCGTCTACACACACGTTTCCGAGTCT
CAGATGCACCAGCTGCAACCCACCGTCACACAAGGGTCGACCGGCTCGGAAAAGATGAAG
GCCGACATCTCCTCGAGACTTCGCACATTGAAGGGGAGATTCATCAAGTAATTATTTATC
TATTTATAGGAGCGGGTGAGCGCATGCGACCAAGCGCGCAAGCACGCAAAAGACACTGCC
TGATCCACAATACATGCCATGACTGAACGAATTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17798g_CDS-001

Protein length: 217 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D17798g_CDS-001 MDRLMKAKARHTSTCAGSEKPNQRLSTSTHSSLNSQFSYNSYPESTYSAQSGGVSPTSQK
PMVVLGDSLIVEKKLDSATATSTTTPSSHNTDSVADIYDSYADNKRLSMGSFSSSGSDLS
DLSNDFLLQAIKDSTTGATGAIKMDFHQSHQGHRQTADQSEKFQGLGYQTEIVYTHVSES
QMHQLQPTVTQGSTGSEKMKADISSRLRTLKGRFIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG