YALI0D17688g

Overview

Description similar to uniprot|P32837 Saccharomyces cerevisiae YDL210w UGA4 GABA-specific high-affinity permease
Locus type CDS
Locus tag YALI0D17688g

Location

Species Yarrowia lipolytica Positions 2167302..2168858
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1557 (nuc.)
Previous locus YALI0D17666g Next locus YALI0D17710g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17688g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17688gYALI0D17688g_mRNA-001YALI0D17688g_CDS-001

Nucleotide sequence

 

>YALI0D17688g
ATGATAGAAATGGAACCTGTTGTTACTTCCGACAACACAGTCCTGGCTACTATGGGCTAC
AAACCCGAGTTGAGGCGAAACTACACCGCGGTTCAGGTGTTTGGTATCGCTTTCAGTATC
ATGGGTCTGTTTCCATCCATCAGCTCCGTTCTGGGTTACTCTCTACCGTCTGGGCCAGCA
GGGATGGTGTGGGGCTGGTTCGTGGCGTCTTTCTGCATTTTCATGGTAGGCCTGTCTATG
GCCGAGCTCGGGTCTTCCCTACCAACATCTGGCGGCCTCTATTGGTGGACTTACCACTTT
GCCGGTGACAGATTCAAACGTCCGCTGTGCTTTTTAGTGGGTTACAGCAACACTCTGGGA
CTCACAGGAGCCATTGTGAGTATCGATTACGGATTTGCGGAGCTGGTTCTGGCAGTGGCA
GGAGTCGCGACCGACGGCAAATACGTGGCGACAAGATTCACAGTCTATGGAGTCTTTGCG
GCGTGTGTCATTTCGCACGCCGTAGCAGGCTCTATTGCCTCTGGACTCATGTCTAAACTG
CAGACAGTCTGCATTTTTCTCAACATTGCCCTGATTGTGGTGATGATCATAGCTCTTCCG
GTTGGAGCGGGAAGTAAACATCATCTCCACAACGGCAGCTACATCTTTGGTCGACTGGAG
AACCTCACAACATGGCCCAAGGGCTGGAACTTTATGCTGGGATGGCTTGCTCCTATCTGG
ACCATTGGGGCTTTCGACTCTTGTGTTCACATGGCCGAAGAGGCATCCAATGCCACCACA
GCTGTTCCATTTGGAATAATCTCCTCCATCGGCATGTGCTGGCTCTTGGGCTTTGTCATC
AACATTGTCCTGGCCTGTGTTCTTTCGCCTGACATCGAAAGAGTACTCAACACTCCCTTC
CAGCAGCCCATGGCCCAGGTGATTTACGACTGTTTGGGCAAAAAATGGACGCTAGCAATG
ATGGTCATTATCTTTACGCTTCAATGGACAATGGGCTTATCAGTTGTGGTAGCTGCCTCG
CGTCAGTCCTGGGCCTTTTCGAGAGACGGAGCCCTGCCGTTTTCAAACTTCTTCAAGGTG
GTCAACAAAAAGATGTCTGTTCCGGTGAGATGTGTCTGGGGAAACTGCACTCTGGGACTG
GTCATTGGCTGTCTGTGTATGATTGACAGTGCAGCGGCTTCAGCCCTATTCTCTCTTGCA
GCAGCTTCCAACGATCTCGCCTGGATGATCCCCATTGCCTGTCGATTGTTCTGGGGTTAC
CCGAACTTCAAGCCGGGTCCATTCTATCTCGGACTTGCTCTGTCTAAAATCGTGTCAGCA
TTCGCCTGCACCTATCTCTGCTTCGCCATCTGCCTGCTCATGTTTCCTTTGAACGGACCA
AATCCAAACAAAGAAAACATGAACTACACTGTGGTGATCAATGGAGCAGTTTGGGCCGGC
TCACTGTGTTATTACTTCTTCTGGGCACACAGATGGTTCCAGGGCCCCAAGAGTAATTTG
GTGCTGGATGCTGTGGAGGGAGATGTAGGTGATTGGGATGAAGAAAAGAAGAAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17688g_CDS-001

Protein length: 519 aa.
Product: GABA (gamma-aminobutyrate) permease, putative

>YALI0D17688g_CDS-001 MIEMEPVVTSDNTVLATMGYKPELRRNYTAVQVFGIAFSIMGLFPSISSVLGYSLPSGPA
GMVWGWFVASFCIFMVGLSMAELGSSLPTSGGLYWWTYHFAGDRFKRPLCFLVGYSNTLG
LTGAIVSIDYGFAELVLAVAGVATDGKYVATRFTVYGVFAACVISHAVAGSIASGLMSKL
QTVCIFLNIALIVVMIIALPVGAGSKHHLHNGSYIFGRLENLTTWPKGWNFMLGWLAPIW
TIGAFDSCVHMAEEASNATTAVPFGIISSIGMCWLLGFVINIVLACVLSPDIERVLNTPF
QQPMAQVIYDCLGKKWTLAMMVIIFTLQWTMGLSVVVAASRQSWAFSRDGALPFSNFFKV
VNKKMSVPVRCVWGNCTLGLVIGCLCMIDSAAASALFSLAAASNDLAWMIPIACRLFWGY
PNFKPGPFYLGLALSKIVSAFACTYLCFAICLLMFPLNGPNPNKENMNYTVVINGAVWAG
SLCYYFFWAHRWFQGPKSNLVLDAVEGDVGDWDEEKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG