YALI0D17622g

Overview

Description similar to uniprot|V2WRZ6 Moniliophthora roreri family taurine
Locus type CDS
Locus tag YALI0D17622g

Location

Species Yarrowia lipolytica Positions 2162810..2164062
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1253 (nuc.)
Previous locus YALI0D17600g Next locus YALI0D17644g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17622g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17622gYALI0D17622g_mRNA-001YALI0D17622g_CDS-001

Nucleotide sequence

 

>YALI0D17622g
ATGCCTTCTACTGATCCCACTGCCAACGCCTCCCGCCGAGAACCTATCAAGTCTTCTGGT
TCTCTCAACCAGTTCAAGTCGTTTACGGTGACTCCCAAGATTGGCACCGAGTTCCCTGAG
CTGCAGTTGACCTCGATTCTGGAAGACGATACTTTGATCCGAGACCTGGCTGTCGAGGTG
TCTCGAAGAGGAGTTGTCTTCTTTCGAAACCAAGATATCACTGACGACCAGCAGCAGTTT
TTGGGTCAGCGGTTTGGCGAGCTGACCGGTAAGCCTGCCGAGTCCACTCTCCATGTCCAT
CCTGCCAAGGATCTCTCCAGACCCGCCGGCAAGGAGATTCTAGAGATTCTTCCCGAGGGA
AAGTCTGCCAAAGAACTGGTCACCAGATTTGATGCAGAGGACGCAGTTGTTCCCACAGTT
CGAGCTTCCCGTGGCTGGCACACGGACATTACATTTGAGCCTGTTCCGTCCGACTACGCC
ATTCTCAAGCTTCTGACCATCCCCGAGAACGGAGGAGGAGACACTCTGTGGGCCAGTGGG
TACGAGGCGTACGAGCAGCTGTCTCCTCACTACAAGGAGCTTCTGGAGAAACTAACAGCT
CTTCACTCGGGTCAATTCTTCCACCAGGTGGTCAACAAGCGAGGAGATGAAGTCTACGAC
CAGCCTAGAGGCAACCCAGCCAATGTAGGCAACAAGCTCTTCACCACCCACCCTGTGATT
CGAACCAACCCCGTCACCGGCTGGAAGTCCCTGTTTGTCAATCCCGGCTTCACCAAGAAG
ATAATTGGACTCACTCCCGATGAGAGCGCCTCCCTGCTTGACTTGTTGTTCCGAAACCTG
AGCCAGGGCCATGATGCTCATGTGCGATTCAAGTGGAACGAGAACGACGTGGCTATCTGG
GACAACCGGTCGACTTTCCACTCGGCCACTTTTGATTTCGATACCGGCGACCGGCTGGGC
CACCGAGTCTTGTCTATCGGAGAAAAGCCGTACTTGGATGTCAACAGTACGGGCTACAAG
GAGGCTCTGGAGGCTGAAAAGCTGGAGGAGACCAAGCAAAAGCTGGAGAATCTGAGCGCG
ACAGAGAAGAAGGAAAAGGTCGACGAGTTGCCTGTCCAGCCTCCAAAGGTGGCTGTTTAA
ACCGATTTATTAACGAATAATTATTGTTGGAGTTCTGGCTCTGGTTCTAGACCTTTACAG
TCCAAGTACATACAGTAAAGTACTGTAGTTGTAATATCAAACTATGTGTCTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17622g_CDS-001

Protein length: 380 aa.
Product: Taurine, putative

>YALI0D17622g_CDS-001 MPSTDPTANASRREPIKSSGSLNQFKSFTVTPKIGTEFPELQLTSILEDDTLIRDLAVEV
SRRGVVFFRNQDITDDQQQFLGQRFGELTGKPAESTLHVHPAKDLSRPAGKEILEILPEG
KSAKELVTRFDAEDAVVPTVRASRGWHTDITFEPVPSDYAILKLLTIPENGGGDTLWASG
YEAYEQLSPHYKELLEKLTALHSGQFFHQVVNKRGDEVYDQPRGNPANVGNKLFTTHPVI
RTNPVTGWKSLFVNPGFTKKIIGLTPDESASLLDLLFRNLSQGHDAHVRFKWNENDVAIW
DNRSTFHSATFDFDTGDRLGHRVLSIGEKPYLDVNSTGYKEALEAEKLEETKQKLENLSA
TEKKEKVDELPVQPPKVAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG