YALI0D17600g

Overview

Description similar to uniprot|O94282 Schizosaccharomyces pombe ncs6 Cytoplasmic tRNA 2-thiolation protein
Locus type CDS
Locus tag YALI0D17600g

Location

Species Yarrowia lipolytica Positions 2160692..2162248
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1557 (nuc.)
Previous locus YALI0D17578g Next locus YALI0D17622g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17600g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17600gYALI0D17600g_mRNA-001YALI0D17600g_CDS-001

Nucleotide sequence

 

>YALI0D17600g
ATGCTGTGTGTGCTGTGCGAGTGCCGCAAGGCCATGCTGAAGCGACCCAAGACGCTGCAA
CCCATCTGCAAACCGTGCTTCTACAACGTGTTTGAGACCGAAATCCACAACACGATTGTT
GAATCAAACCTCTTCTTTCCGGGAGAACGGGTGGCCATTGGAGCCAGTGGTGGCAAAGAC
AGTACGGTGCTTGCGCACGTGATGAAAACGCTGAATGAGCGGTACAACTATGGTGTGGAC
TTTGTGCTGCTCTCTATCGACGAGGGTATCCATGGCTACCGAGACGACTCTCTGGAGACG
GTGAAGCGAAACAAGGTGCAGTACGACATGGATCTGGAGGTGGTCAGTTACAGTGAGCTG
TACGGGTGGAGCATGGACCAGATTGTGGCCCAGATCGGCAACAAGAACAACTGCACCTAC
TGTGGAGTGTTTCGAAGACAGGCTCTTGATAGAGGTAGTGCCAAGCTAGGAATCGCACAT
ATCGTCACAGGTCATAATGCTGACGATATGGCCGAGACAGTGCTGATGAACTTGTTACGG
GGCGATACTGCTCGTCTGGATAGATGTACCGAACTGGTGACTGGTTCAGATGACTCTCCT
GTCAAGAGAAGTAAGCCTCTTAAGTACGCATATGAAAAGGAGATTGTGCTTTATGCCCAT
TACAAGAAGCTCGACTACTTTTCCACCGAGTGCACATACTCTCCCGAGGCATTCCGGGGC
ACGGCTCGTACGCTGATCAAAAATTTGGAGGCCATTAGACCGTCTACCATCATTGACATC
ATTCACTCTGGAGAAGCCTTTGTGCTCAAGAAGAAGAAGGAGAAGAAAGGCAAGGGCTCT
GTGGTTGTGAAGGCCAAGGTGGAGGAAAAACCTGTCCCCTCCGGTGGCTGTTCGGTACCT
CTAGCATTTGATTCCAGCCTTGGGCTCTCCAACAGATGCACCAAGTGTGGCTATTTATCT
CATAATGCCGTTTGCAAGGCCTGTGTCTTGCTGGAGGGTCTAAATGCTGGACGAGCCAAG
ATGCAGATTGAGGGAGACAGCGCTGACGGAGCTGCTAAAAACATCAAGACCTTGGAGAAG
CTGGCCTTGAGTATTTAGTGGTATATAGCATAGTTATTTATTGATACATGGGGTAGCCAT
GATGGGTGAAGAATCAACACCAGCGAGACGCATCTAAAAAGTGCTCTATTTGTCGTGCTA
AGCTCATAGTCGTAAGCAGAGGGAGCTCTGAACGGCTCAGAACAGCTGGATTAGCCACAT
TACGAAACAATCAATCATTATCGTCCCATATTTCTGCTTCTTCGGAGTCCGACAAGTGTG
GCTAAAGTCGGAGAGTGGGGATAAGCCACGAGTATGAGATTCATATTGTGGAGAAAGGAG
GGTAGTATGGCGAAAACAGGGGATTGGAAGACGAAATTTAACAGCTCAGGAATGGGTGTG
AACAGAATGACGTCATTTCCGTCTGAAGCATGCACATCAGGTTGCACACATATCAATATG
ATGCACAGAAGACACCAAAGAAAGACCACACTCTCTATCAAATTGTTCATCCGATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17600g_CDS-001

Protein length: 366 aa.
Product: Cytoplasmic tRNA 2-thiolation protein, putative

>YALI0D17600g_CDS-001 MLCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKD
STVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSEL
YGWSMDQIVAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLLR
GDTARLDRCTELVTGSDDSPVKRSKPLKYAYEKEIVLYAHYKKLDYFSTECTYSPEAFRG
TARTLIKNLEAIRPSTIIDIIHSGEAFVLKKKKEKKGKGSVVVKAKVEEKPVPSGGCSVP
LAFDSSLGLSNRCTKCGYLSHNAVCKACVLLEGLNAGRAKMQIEGDSADGAAKNIKTLEK
LALSI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG