YALI0D17006g

Overview

Description similar to uniprot|P38843 Saccharomyces cerevisiae YHR142w CHS7 control of protein export from the ER (like chitin synthase III)
Locus type CDS
Locus tag YALI0D17006g

Location

Species Yarrowia lipolytica Positions 2099604..2100743
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1140 (nuc.)
Previous locus YALI0D16984g Next locus YALI0D17017g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17006g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17006gYALI0D17006g_mRNA-001YALI0D17006g_CDS-001

Nucleotide sequence

 

>YALI0D17006g
ATGGGATTCGGAGACTTTGACTTCCTGTGCAACAAATCGCCTCTTCCGCTATGCATGCTG
GTAGGCCCTTACGACAAGCCCACCACAGACCAGACCCCGCTGCTCAACGGAATCGGACTC
ATGTCTGAATGCTACCCGCGGTCCATCGAGCTCGCAAACACCATCATTTTCCAGGTCGGA
AACACCTTCATCCACATTGGTGCACTCCCCGTGATTCTCATCATGATGTACACAGTCAAG
GGCAAGTACACCGCCATTGGACGAAAAGAGCTGTTCCACTTCCTCAGTTGTTTCCTGTTC
CTCACATGCATGTCTCTCGTTGTTGACGCCGGAGTCGCTCCCCCTGGATCCGCCGCATAC
CCCTACCTGGTAGCCATTCAAAATGGAGCCATTTCCGGAACCATGTGGTCGCTGGTGAAC
TTTGGATTTCTGGGGTTCCAGTTCTACGAGGACGGAACTCGACGAGCCATGCTGTTTCTG
CGAGGAACTACCTTGTGTGCTTTCCTGCTTACTTTCATCATTTCTCTCTTCACTTTCATT
CCCTCTTGGGGTTCGGACGCCATTGGCCCCCATAACACCGTGGGTCTCTTTGTTGTTCTC
TACCTCTTCAACCTCATCTTTGTGGTTGTGTACATTCTTTCTCAGTTTGCATTGGCCATC
TTTATCCTGCAGGATATCTGGATGATTGGAGCTGTTGCTCTGGGCACCTTTTTCTTTGTG
GCCTCCCAGATTCTGCTCTACCCCATTTCCTCCATCATCTGTAAGCAGGTCAAGCACTAC
ATTGACGGCACTTTCTTTGCCACCGTCACTAACCTGTTTGCCGTCATGATGGTCTACAAG
TTCTGGGACATGTCCACCAAGGAGGATCTCGAGTTCTCTGTCGGACAGAAGGACAACATG
TGGGAGACCAAGGAGCTGCTTGGTGAGGATAACGGCATGAGCAGATACGAGGTGAACGGC
TCCGAATACGCCGGTTCCACTTTTGCTCTCAACCAGCATCAGTTCTAATTGAGCAGCCGA
TTAATCTGCCAATCGTGTCTACAATCACGTTACAGCACGCTCACTGTTTGTTAGCCAAAT
GGCTTTGTTACCCCCGCGAGAGATAAAAAGGTATATATAATAAAGGAGGATTGTGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17006g_CDS-001

Protein length: 336 aa.
Product: Conserved hypothetical protein

>YALI0D17006g_CDS-001 MGFGDFDFLCNKSPLPLCMLVGPYDKPTTDQTPLLNGIGLMSECYPRSIELANTIIFQVG
NTFIHIGALPVILIMMYTVKGKYTAIGRKELFHFLSCFLFLTCMSLVVDAGVAPPGSAAY
PYLVAIQNGAISGTMWSLVNFGFLGFQFYEDGTRRAMLFLRGTTLCAFLLTFIISLFTFI
PSWGSDAIGPHNTVGLFVVLYLFNLIFVVVYILSQFALAIFILQDIWMIGAVALGTFFFV
ASQILLYPISSIICKQVKHYIDGTFFATVTNLFAVMMVYKFWDMSTKEDLEFSVGQKDNM
WETKELLGEDNGMSRYEVNGSEYAGSTFALNQHQF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG