YALI0D16962g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D16962g

Location

Species Yarrowia lipolytica Positions 2093720..2094640
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 921 (nuc.)
Previous locus YALI0D16940g Next locus YALI0D16984g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16962g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16962gYALI0D16962g_mRNA-001YALI0D16962g_CDS-001

Nucleotide sequence

 

>YALI0D16962g
ATGAGGAGACTACGCGACTTTGCTAAAGATTCCCTGGACACGCGATACCGCTCGGATACC
CTTTCTTCTCTTGATTCTAACCTCGAGCTCCAACCTCCGACTCGTGCTCCCTCAGCGCAC
ATCTCCAACCACCCCAAAGACCGCCCGGAGTACGTGAGTCAGCTGGCGTGCTACCGCAAG
TTTCACCGCTCATCCAGCCAGATTTTCAATGACCTCAAACTGATAAGAGTTGTTTCTGAC
GACACCAGCGACAAGAAGAAACGTGAGAAGGAACCCGAACCCGAGGAAGAGTCACTCGAA
AGCCTGATGTACGTCTTCCAGGTTCTCAACAACACGGGGCCACCCGGCTCACGGGCCGTT
TCTGCGTCAAAACCGTCTGTGTCCTCGCCCAAGCCATACCCTACTCAGATACCCCCACAT
CAACCTCTGCAACAGGTCTTGTCCCCGCAGGTGATGGACACCTACACAGAGAGCACCGAC
CGATCGTCAGACCAGAACCAGCCCAGTGTGTTTTCGGACCTGACGCAATTGTCGACGCCC
CAAAGCTCTCCTGCGGAAACCCACGAGCCCCAGCTGCGGTTCTGTCCTGAGGTGGAGCTC
GTTGTGTATCAACGCAAGTACCCACTGATCAAAAGCAACAAGTGGCAGGACCTGCTGCGT
CTGAAACGGTCCCACCCGGAGTACGAACATGAAGAAGAGGAGTGGACTGACACCATCAGC
AAGCCAATTCTCAAGAGCAGAAACAACCATAACGCCGAGCGTGAGATGGCCACGGTGCGG
CGTGAGGACCAGTTGTCCATCGACGATTTTCTGAAACGTCTCGAGACCTACGATACCATC
AGGGAAGAGATGCAGGATTACTTTGCCTGCAAGCGGGACCATGTGATCTACAGATACAAC
CGTCAGTTGAGGGAGATGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16962g_CDS-001

Protein length: 307 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D16962g_CDS-001 MRRLRDFAKDSLDTRYRSDTLSSLDSNLELQPPTRAPSAHISNHPKDRPEYVSQLACYRK
FHRSSSQIFNDLKLIRVVSDDTSDKKKREKEPEPEEESLESLMYVFQVLNNTGPPGSRAV
SASKPSVSSPKPYPTQIPPHQPLQQVLSPQVMDTYTESTDRSSDQNQPSVFSDLTQLSTP
QSSPAETHEPQLRFCPEVELVVYQRKYPLIKSNKWQDLLRLKRSHPEYEHEEEEWTDTIS
KPILKSRNNHNAEREMATVRREDQLSIDDFLKRLETYDTIREEMQDYFACKRDHVIYRYN
RQLREM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG