YALI0D15972g

Overview

Description weakly similar to uniprot|P39980 Saccharomyces cerevisiae YEL065w SIT1 probable multidrug resistance protein
Locus type CDS
Locus tag YALI0D15972g

Location

Species Yarrowia lipolytica Positions 1977549..1979384
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1836 (nuc.)
Previous locus YALI0D15950g Next locus YALI0D16016r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15972g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15972gYALI0D15972g_mRNA-001YALI0D15972g_CDS-001

Nucleotide sequence

 

>YALI0D15972g
ATGCTGAATACCTGCACCAATACCACCTTCACCAACAATACCATGTGGGCCGTCCAAAAC
CCAATCAGACAAGCTGAAAGAGATGAAACAGATCCTCCCTCTCCCAATCCCAAGTGGCTA
TCAGTCGCTGGAGATGGGCAGCAAACTCGTGCAGCGGCAGAGATGGAACAGATTACGTCT
CTGTGGAACAGAACCGACTTTTGGCTGGCCTGGGCATCCATGTTTCTCGTCTCAATTGCG
CTGGCACTAGAGAAGATGACGTTCAAGGTCTACTCGACTTTTGCCACCTCCGATTTCAAT
GAAATGTCTCTGCTCTCTGCCCTCAATGTTGTGCAAGCTGTCATGTACACTGCTACAATG
ACGATCATGGCCAAGTTTGCTGATGTTTTAGGCCGCTTCGAATCTTTTCTTCTCTGTGTC
ATATTGTTTACCATGGGAGAAATAATGCTCGCAGCGTCATCAAACATTAGCACATACTTT
GCTGCTCACATTTTCTACGTCTTTGGACAGGTGGGAATCCGGTTTCTTCAGCAGGTTTTT
GCAGCGGACACTTCTTCGCTTCGAAACCGACTTTTCTTCGTGGTCATACCCAACTTTGCG
TACATTTTTGTACCCTGGTGCTCGGCCCCCATCACCAACGCCATCATCAAACATTCCACT
TGGAAATGGGGCTATGGGATGTGGTGCATCATTTTGCCGGTAGTTTCTGTGCCGGTTCTT
GTGATTCTCTTTAGACTCAAAAGAAGAGTCAAAGTCGTCAATGGAAAGAAGTATGACAAG
GAAAAGTACAAAGGTTCCAGGTGGAATTTCATCAAAGAGCGTCTTCTGGAGTTTGATATG
ATTGGACTGGTTCTGTTCACTGGTGGTCTCAGCTTGCTGTTTCTTGCAGTGACCCTGGTC
AAATCACAAGACTCCTGGAAACAAGCCCATGTTCTCTCGATGATCATCATCGGTCCAATT
TTGCTTATTCTTTTCCCTTTCTGGGAAATGTACCCAAAATACCCCTTCCTGCCCTTCTCC
GCAATGAAAAACAAAACCCTCATCACAGGCTGCTCTTTTTGTCTAGTCTACTCTATCGCC
CAGAACCTCTACAACCCCTACTACTTTCCTTGGCTACTGGTATGTAAGGGACTATCCGTT
ACTGCAGCATCAAACACATCTGCAACGCTAATGGTGGCCTCAGTGGCTTCTTCTGTAGTG
GCTGCGTTCATTCTCCGCTACACAAACCGAGTCAAACCAGTCATTGTTGCCGGTATCTGT
ATCTACATGCTAGGACTAGGTCTCACTTATCACTACAGACAACCGGATCAATCATTGGCT
AAGTTCATTGTTACTCAGGCAGTCGAAGGAGTGGGGCAGGGGTTTCTCCAATCACCTTCT
CTCGTTATTATTCAAGCTTCTGTCCCCAAAAACCATGTGGTTTCAGCTACCGCCATCTTC
TATGCGGCCAACTCCATTGGCCAGGTGATTGGAGACGCCATTTCGGGCTCCATGTACCGA
CAGACGTACCCCAAGAAGCTGGCGGACTATGCTCCCTTTTTAAATGCCACTGAAATTGAC
CAGATGGTAAACAATGTGGCTGCCCCTCTACGTTACAAATGGGGAACATCTGAAAGAACT
GCAGTGATAGAAGCCTTCAACCACATTTACAGAAAAATGCTCTATGGACCGATGATTGTG
GCCGCTGTGTGTATCCTGATTGCTCTTGCGCTGCCTAACATTGATTTGAGCGAGTCTGAA
GACGGTTCCGAATGCACTATTGACGATGATAAGTCGGTGATTGTTCACAAGTCGTCTTCA
AAAACTGCTTCAGCAGTTATTGAGAAGCAGTTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15972g_CDS-001

Protein length: 612 aa.
Product: Conserved hypothetical protein

>YALI0D15972g_CDS-001 MLNTCTNTTFTNNTMWAVQNPIRQAERDETDPPSPNPKWLSVAGDGQQTRAAAEMEQITS
LWNRTDFWLAWASMFLVSIALALEKMTFKVYSTFATSDFNEMSLLSALNVVQAVMYTATM
TIMAKFADVLGRFESFLLCVILFTMGEIMLAASSNISTYFAAHIFYVFGQVGIRFLQQVF
AADTSSLRNRLFFVVIPNFAYIFVPWCSAPITNAIIKHSTWKWGYGMWCIILPVVSVPVL
VILFRLKRRVKVVNGKKYDKEKYKGSRWNFIKERLLEFDMIGLVLFTGGLSLLFLAVTLV
KSQDSWKQAHVLSMIIIGPILLILFPFWEMYPKYPFLPFSAMKNKTLITGCSFCLVYSIA
QNLYNPYYFPWLLVCKGLSVTAASNTSATLMVASVASSVVAAFILRYTNRVKPVIVAGIC
IYMLGLGLTYHYRQPDQSLAKFIVTQAVEGVGQGFLQSPSLVIIQASVPKNHVVSATAIF
YAANSIGQVIGDAISGSMYRQTYPKKLADYAPFLNATEIDQMVNNVAAPLRYKWGTSERT
AVIEAFNHIYRKMLYGPMIVAAVCILIALALPNIDLSESEDGSECTIDDDKSVIVHKSSS
KTASAVIEKQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG