YALI0D15796g

Overview

Description some similarities with uniprot|P32380 Saccharomyces cerevisiae YDR356w NUF1 spindle pole body component
Locus type CDS
Locus tag YALI0D15796g

Location

Species Yarrowia lipolytica Positions 1933345..1934401
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1057 (nuc.)
Previous locus YALI0D15774g Next locus YALI0D15818g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15796g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15796gYALI0D15796g_mRNA-001YALI0D15796g_CDS-001

Nucleotide sequence

 

>YALI0D15796g
ATGGCTAATCTGTTCAAACGACGAGGGGAGAGTATTGGAGGGGGTCACGCAAAAGTGGAG
ACTGCGGTTGTTCAGGCGCCAAAGTCGAAGCGGGTAAAAACCCAACATGTTATCACCAAC
GATGATCACCATACCGAACTGTATGATACCCGTATGACTCGACAAGAGCAGCTACTCTAC
GAATTTCAAAAGGCAGCAGAAGAGGCACAGACAAGTGAGTATGGGCTCCGAAAGATGAGC
TATGGTTATTTGATCTTCGAGATTTGGGATAATAAATGGAGGAGGAGGCTACATTTTGAG
CCAACCGACATTGAGACAGAGAGGTCCAGGGAAAGAGGAATCGACTCGACTAACACAGAG
TCGGATAGTCTCATTACGCAACTAACAAGTGAGTTAGAGGCGCTGCGTCAACAAAATCAG
CATATGCAGTCCCAGATGGCAGAGGCTACGGGGGCTGTGGAGGAGCGAAATAATTACATC
GCGGTCAAGGAGAGTGAAACAAAAGCACTACAGGAGAAGGTGGAATCACAGAGAAAGGAC
ATCAGGAAGTACAAGTCTAGCTTGAAGCAACATAAACAGGATGAGCGCTCTATGGAAGCC
ATATACAGCATTGTACGACAGTTGACAGGCACAGATGTGGAGATTGTGTCACAGAACTCC
CAGGGTCAACAGTTGTTCCTGTGCAAGCAAACAGGCAAAAACGGGACGGTAAGGTACCAC
CTAGGACTGGATGGAGCAGAAAGTCCAGACTTTGCTTACCAGATCATCACTGAGACTGAT
GAGGACAAGAAGGTAGCAAAACTGCTGCCAGAGTACTTGCGTGGCAGCATCACTTTTGCA
AGGAAAGAGGTGAGTACAGTTATCTTGCAACAGATATATTCATCCAGCTCGTTCATATTA
ACACAGGCAATTTCATTCTTTAACAAGATCAGTGTTACTCTTGCCAAGAAATGACGCGGA
GGTTGACACAAGTGTACAATATGGTCAGATTACCGTTCTTTGTTTGAGGGACTGCGCAGA
CTGGATCAGCATTAATCATATCTATTCTTATTTTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15796g_CDS-001

Protein length: 251 aa.
Product: Conserved hypothetical protein

>YALI0D15796g_CDS-001 MANLFKRRGESIGGGHAKVETAVVQAPKSKRVKTQHVITNDDHHTELYDTRMTRQEQLLY
EFQKAAEEAQTKSDSLITQLTSELEALRQQNQHMQSQMAEATGAVEERNNYIAVKESETK
ALQEKVESQRKDIRKYKSSLKQHKQDERSMEAIYSIVRQLTGTDVEIVSQNSQGQQLFLC
KQTGKNGTVRYHLGLDGAESPDFAYQIITETDEDKKVAKLLPEYLRGSITFARKEAISFF
NKISVTLAKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG