YALI0D15774g

Overview

Description weakly similar to uniprot|P47158 Saccharomyces cerevisiae YJR122w CAF17 CCR4 associated factor
Locus type CDS
Locus tag YALI0D15774g

Location

Species Yarrowia lipolytica Positions 1931707..1933188
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1482 (nuc.)
Previous locus YALI0D15752g Next locus YALI0D15796g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15774g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15774gYALI0D15774g_mRNA-001YALI0D15774g_CDS-001

Nucleotide sequence

 

>YALI0D15774g
ATGGGAATCGATGTGCCGCTCTTTCGACAAATGACACCAATGGGACATCGGCTCAGTTCC
ACCCGTCCCAATTACATGACTTCCATCAGACTGAAATCGACCATCCCTCATGTGGGTCGA
GTTGATTTGACCAACAGCAAGACCATGGTACATGTCAGTGGCCGGGATGCTGCCAAATTG
CTGAATGGTCTATTCACCCTCCCGGTTTCCTCGGGTGCGGCCACTCCCTTTTCTGGAGTT
TTTGGAGCGTTTCTCAATGGAAAAGGACGAGTCATTACAGACGCATTTCTCTACACAACT
AGCAACCATACCGAGGAGGACCAGAGCTTTGTGATTGAGTTCGACAAGGCCGTGGAGGAC
GAATTACTACTGCACTTGAAACGACACAGAATTAGAGCTAAAGTCAAGATGGAGAAGCTG
ACTGACTATGAGTGCATTTTCATCTGGAACAGAGACGCTACCCCTGACTACTGGCGCCGA
GAGAATGAATGCGACAGTGGCTTTTTCCAGAGTTTATGCGAGGTGGCATGGAGCGTGGCT
GAGGTTGGAGAGACTTCCGAGGTTGAGGAAAAAAATGGCGAGCCAGCACAAAAGCCGCTC
TATGGCCTTCTAGTGGACGATAGATATCCTCTTCTAGGCATTCGAATGATTCTTCCAGCC
AAAACTTCCACGACCTACTTTTCAGCCATCCCCTCCGCCAATCTAACACAATATAACATG
CTGCGCTACATCAGGGGTACCCCTGAGGGATCGCGCGAGATCCCTCCCAACAAGGCTCTC
CCCATGGAGTCCGATCTAGACTATATGAATGGTCTGGACTTTAACCGAGGCTGCTACGTG
GGCCAGGAGCTGACTATTCGAACCCACCATACCGGTGTAGTCAGAAAACGAATTGTGCCC
TTCCAGCTCTACCAGGAGGGCCAGGAGCCCGGTGAGTACGAGTGCCAGTATGACCCTGAG
CTTTCTGGGGCTCTCCCTCCTCTCTTGGACGGCTCTAATGTCATTTCGCTCAATTCCCAG
CCTGAAGAAAGAACTTTCGCATCGTCGCCTTTCGATAGCCCCAAGAAGGAGGCTGAACCT
AAGTCCGAAGAAGCAGCTTCTGAGGGTGGAGTTCCAAGTTGGGCCAAGCCCAAGGAGACC
GATGCAGCAGAGAGTAATCTCCCTAACAAGCCCAAGCCGGTTAAGCTTGGAAACATTCTA
TCACATCATGGAAACGTGGGTATGGCTCTTGTTAGACTGGACAAAATCATGCAGCAGCAA
GATATCCAGCTGGCTGTCGAGCTTCCCCCCGGACCCAACGGAGAGGTCAATTATCTTCGA
GCCAAGCTCTACTACCCTCTTTTTGTGACTGACGTCAGTGAGGCCGAAGCCGAGGCCGAG
GCTGAGCTGGAGATGGAACGGGTTCGAAAGGAGGAGACACACAAAAATGGACAGTTGTAA
ATAGACTATTTAAGTACAGTAACTCATGAAGGTACATAATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15774g_CDS-001

Protein length: 480 aa.
Product: Conserved hypothetical protein

>YALI0D15774g_CDS-001 MGIDVPLFRQMTPMGHRLSSTRPNYMTSIRLKSTIPHVGRVDLTNSKTMVHVSGRDAAKL
LNGLFTLPVSSGAATPFSGVFGAFLNGKGRVITDAFLYTTSNHTEEDQSFVIEFDKAVED
ELLLHLKRHRIRAKVKMEKLTDYECIFIWNRDATPDYWRRENECDSGFFQSLCEVAWSVA
EVGETSEVEEKNGEPAQKPLYGLLVDDRYPLLGIRMILPAKTSTTYFSAIPSANLTQYNM
LRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYVGQELTIRTHHTGVVRKRIVP
FQLYQEGQEPGEYECQYDPELSGALPPLLDGSNVISLNSQPEERTFASSPFDSPKKEAEP
KSEEAASEGGVPSWAKPKETDAAESNLPNKPKPVKLGNILSHHGNVGMALVRLDKIMQQQ
DIQLAVELPPGPNGEVNYLRAKLYYPLFVTDVSEAEAEAEAELEMERVRKEETHKNGQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG