YALI0D15444g

Overview

Description weakly similar to uniprot|P40985 Saccharomyces cerevisiae YJR036c HUL4 hect domain E3 ubiquitin-protein ligase
Locus type CDS
Locus tag YALI0D15444g

Location

Species Yarrowia lipolytica Positions 1893909..1897068
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3160 (nuc.)
Previous locus YALI0D15422g Next locus YALI0D15466g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15444g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15444gYALI0D15444g_mRNA-001YALI0D15444g_CDS-001

Nucleotide sequence

 

>YALI0D15444g
ATGTTCAACTTGCCGTGGCAGAAATCCCGCGGCTCAAAGTCGTCGCCCAGTACTGTACTA
AGCGAGCTACATGTTGGCAGTTCTGTTCCGACCATTCCAGCTTCTAAAAACCGCCCAAAC
AGCTCACGATCCATCACAACCACATGTTCGTCTTGTGGAAGCAGTATAAGCTTACCGCCA
CACCTCCGATCATTCCTGTGCTCTACCTGCAACACCATAAAAGACTTGCGATCGACTAGC
GTCCGAGGGGGGGATCTGGAGCCAGTATCGTGTGCACTGCTGGAAAAGTGGATTGAAACA
CCCCATTCTCTGTGCAAGAACCTCTTTGACAGCTTTTCGTCACCAACCTGCCTAAACGCT
TCATTCCATATGTCCAACGTCAAATTGCACTCCATTAGCACGTCTCATGGCCTAGATCTG
GATGAAATCGATGTCTTCTTTCAACAAGTATGGAGTTTGGGTCCGGAACCGCAATTGGCA
GTTTTGAGAGGTGCTCTAAAGCTGCTTAGAAGGCCGCGCATGTTACTCGACAAGCCCGAA
AAGCTGCGCTTCTTGATCATCCTTATGGCCATTCCTTCGCTGCAAAATGTGAGTCTGCTG
AACAGAGGACTGAGTGAACAGATGAAGGAACAGAAAGAAGGTAAGAGGGTGAGGGGTCCC
AGGGTAGCTACCCCTGAGTTTCAAGAAAGGAGAAGACCTTCTGGCGATGTTCCCAGAGGG
GAATCTGAGGGCCGGACTAAAGTGGGAGAGCGCAAGGGTGGTGAGAACGGCGTTTCCGAC
CGTGCCGGGCTGTCTCAAAACAAGGGGAATATTCCTGTTGGTGTTCCTGCACCAGTAAGA
AAGCCCGATGGAAGTTTTGGTGTCACAGGTGGAGGCGCTGCTGGCAGGAGGGAGAGCGCG
GGGAGTGCGATCCCGGGGGTTACTGGAGGAAGTATTACATCAAAAGAGAGGTCGCGCGGT
GAAAGTGGCAGTAGTCCCAGTTCTATTTCACCTGGAGAATCCCGCCCAGGGTATCGTGGT
GAACCTGTGAGCTCAGGTAGGCGAGGAGGTGCTGGAGAAACACCGCCCAATGGCGCGTCT
GAGTCACGTGTATCGCCACCGGCTGAGCTCCATGACATGCCCCCTGCTAACCATGTGCGA
TCTAACTCTTCCAATCGATGCATGGGACCACCGCCTCCTACATCATCGATCCCTTATCTT
TCTTACTGCATCCTATCACACCTCATCGGCTACCAGGCCCATACAGGTGCTGAACTCAAC
AAAAACATTGTCAACTGGTATCTGCGCTTTTCCAGTGACCGGTTTTCCCTCGTTGTAGAC
ATGGTGAATTCGTTCATCTCCAGTCGACTGACGTACATGTATCGGCATTCGAGTGATGGA
GATGATGATGAGGGTGTCAGCGGGGGGGTTGGGAGTGGAGGCAGTAGTGGTGGACGGGTC
TGGTCGCGTGATCGTGGTCCTGCCGCTACACCTGGGTCTCTTCCTAAGGTGGGCCCAGTT
AGTGGCTTGACTCGGTCTTCGAGCAAGTCACGTCGCTCACGGAAAATCCGGATCTACGAC
TACTGCAATGACTGGCAAATTACAGCAGCTGCCCGTTTCATGTCTGTGCTGTTCAACGTC
AATTTCGTCGCCTCTTACTTACCCACGTCGCAATTTTACAACACAATGGTTGATTTCGTG
GATGTTTGCGGTGATTTCGGGGCTTGGCAATCGCGTGATGGTACCAATTTGAATGCAGAC
ATGCTCTGTAACGGGTCGCTATTTGGGGGAACTGATACCTCTCCAGATGCGACCAAGTTC
ACGTTTTGTGCCTTTCCTTGTCTGCTTTCTCTTGGAGCTAAGACTTCGGTGCTCGAATAT
GATGCCAAGAAGCAGATGGAATTCAAAGCTCGGGAGGCATTCTTCGACTCTCTCAGTCAG
CGCCAGCACATTGAACCATATCTCAAGATCAAGGTGAAACGGGAATCCCTTCTTGCCGAT
TCTTTATCTGAGATAGAACGTAACAACGGCAACTACAAAAAGTCCTTGCGTGTTGAGTTC
GTGGGCGAACCTGGCATTGATGTTGGCGGAATCCGAAAGGAGTGGTTCTTGCTATTGAAG
ACTGCTCTCTTCAACCCGGCCAGAAACTTATTTGTCGAGGATGAAGAGTCGCATTACTGC
TGGTTTAACCCTGGTTGCAAAGCTCAGGACGGTGACCTTCGAGAATACAGACTTGCCGGT
GTAATTACTGGCTTGGCACTGTATAACTCTAGCATGCTCGACTTGCCACTTCCTCCAGTT
GTTTTCAAGAAGCTCTTGGGATGTCCGGTCGGACTCGAAGACTTCACAGTTGTGAATCCG
ACGGTTGGGCGGTCGCTCTCGCAGCTTCTGAAGTTCACTGAGTCTGAAGTGGAGTCACTG
AACCTCAGCTACAATGTCATTATCGATTCTGAGGGTGTGAAGAAGTCGTGTGACTTAATC
AGCAATGGAAGCCACGTGAGTGTCACGACACGTAACCGGCGTGATTACGTTTCAAGGCTG
GTCAAGTTCTTTCTGGAAACATCTATTTCAACAACGTTTGCAGAATACAAGAAAGGCTTC
CATTCCGTTGTGGGAGGCAATGCCCTCTCATTGTTCCGCCCGGAAGAGCTTGAAGCGCTA
GTGAAGGGATCTTCAGAACCTTTGGATATCGGCACCCTGAAAACCGTCACTAGATACCAG
AACTTCACTACTGAAGATCCGGAGTCGGAACTTGTCGTGAGATGGTTTTGGAAATGGGCT
GAGAACCTAGAGGAGGAGAAGCAGAAGAAGTTGCTACGATTCATCACTGGAAGTGACAGG
ATTCCTGCCACAGGTATTTCGAACATGAACTTCAAGATTACTTTCTCGGGTCCCGACTGT
GACCGTTTCCCCGTGAGTCACACTTGTTTTAACGAGCTGTGTGTGTATGGATATTCGAGC
AGGCAGAAGTTCATTGATAAGATCGTTATGGCAATGAACGAGAGTGAAGGGTTCGGTATT
AGATAGCCCGCACTGGCGAGCTGTGAACTGAGGTTGCTCCCAGCCTGTTTCACTGATAGT
TGGAAAGTTGCATCATATTGGGTGAGGAGGATGAGTGAAGTCACGAGTAAATTATGGTAC
AAATACAAACTAGCATATAGACAAGAGTGTAAATGTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15444g_CDS-001

Protein length: 1002 aa.
Product: Conserved hypothetical protein

>YALI0D15444g_CDS-001 MFNLPWQKSRGSKSSPSTVLSELHVGSSVPTIPASKNRPNSSRSITTTCSSCGSSISLPP
HLRSFLCSTCNTIKDLRSTSVRGGDLEPVSCALLEKWIETPHSLCKNLFDSFSSPTCLNA
SFHMSNVKLHSISTSHGLDLDEIDVFFQQVWSLGPEPQLAVLRGALKLLRRPRMLLDKPE
KLRFLIILMAIPSLQNVSLLNRGLSEQMKEQKEGKRVRGPRVATPEFQERRRPSGDVPRG
ESEGRTKVGERKGGENGVSDRAGLSQNKGNIPVGVPAPVRKPDGSFGVTGGGAAGRRESA
GSAIPGVTGGSITSKERSRGESGSSPSSISPGESRPGYRGEPVSSGRRGGAGETPPNGAS
ESRVSPPAELHDMPPANHVRSNSSNRCMGPPPPTSSIPYLSYCILSHLIGYQAHTGAELN
KNIVNWYLRFSSDRFSLVVDMVNSFISSRLTYMYRHSSDGDDDEGVSGGVGSGGSSGGRV
WSRDRGPAATPGSLPKVGPVSGLTRSSSKSRRSRKIRIYDYCNDWQITAAARFMSVLFNV
NFVASYLPTSQFYNTMVDFVDVCGDFGAWQSRDGTNLNADMLCNGSLFGGTDTSPDATKF
TFCAFPCLLSLGAKTSVLEYDAKKQMEFKAREAFFDSLSQRQHIEPYLKIKVKRESLLAD
SLSEIERNNGNYKKSLRVEFVGEPGIDVGGIRKEWFLLLKTALFNPARNLFVEDEESHYC
WFNPGCKAQDGDLREYRLAGVITGLALYNSSMLDLPLPPVVFKKLLGCPVGLEDFTVVNP
TVGRSLSQLLKFTESEVESLNLSYNVIIDSEGVKKSCDLISNGSHVSVTTRNRRDYVSRL
VKFFLETSISTTFAEYKKGFHSVVGGNALSLFRPEELEALVKGSSEPLDIGTLKTVTRYQ
NFTTEDPESELVVRWFWKWAENLEEEKQKKLLRFITGSDRIPATGISNMNFKITFSGPDC
DRFPVSHTCFNELCVYGYSSRQKFIDKIVMAMNESEGFGIR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG