YALI0D15422g

Overview

Description similar to uniprot|P15380 Saccharomyces cerevisiae YOR348c PUT4 proline and gamma-aminobutyrate permease
Locus type CDS
Locus tag YALI0D15422g

Location

Species Yarrowia lipolytica Positions 1886884..1888570
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1687 (nuc.)
Previous locus YALI0D15411r Next locus YALI0D15444g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15422g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15422gYALI0D15422g_mRNA-001YALI0D15422g_CDS-001

Nucleotide sequence

 

>YALI0D15422g
ATGGACAAAACATTTTCAGTCACCGTCGAGCCATCCCCAAGTCCCTCGGACCTGGAATAC
GGAGAAGTCAAGCACACCACCAAAAGAGCTCTCAAATCACGTCATGTTCAGCTCATTGCC
CTAGGAGGGTGCATCGGAACAGGTCTGTTCATTGGATCCGGAACTATCTTATCGAGTTCA
GGTCCCGGCAGTATGTTGTGTGCCTACATTGTCATGTCCTTTGTCATTTGGACTGTCATG
AACGCACTAGGGGAGATGACTACATTTCTTCCCATCGACGGAGCAAGTCCTCCCATGTAC
GTGAACAGATTTGTGGACGACTCGTTGGCATTCGCATGTGGCTGGAACTATTGGTATGCA
TATGCTATCCTTGTCGCTGCAGAAGTCACCGCTGCAGCCATTATTTTCGAGTATTGGACC
TCTGCTGTGCACTCTGCAGTATGGATCACTATCGTTCTCGTCACCTGTGTCTTGTTGAAT
ATCATCGCTGTTGCCATATTCGGCGAGACAGAGTTCTGGTTTGCGTCCATCAAAATCATT
GGTATTCTGGGATTAATTATTGTTGGAATCGTCATCTTCTTCGGTGGAGGACCTAAACAT
GACAGACTAGGCTTCCGATACTGGAAGGACGGCAAGGCGTTTCTGCCTTACATCATTGAT
GGTGCGGGTGGACGATTCTGCGGCTTCTGGAGTGCTATCATTCGAAGTGGGTTCTCTTTC
ATTCTTAGTCCCGAGCTGGTAACTATTTCTGCTGGAGAAACTGAGGCGCCCCGAAGAAAC
ATCCCCAAAGCAACCAGACGATTTGCTTATCGTCTTATCTTCTTTTACATCTGCGGCTCT
CTGGTAATTGGAACCATTGTGTCATCAGATGACCCCCTTCTGCTCAACAAAAAGAATGAA
GATGCCTCTGCCTCGCCTTTTGTCATTGGAATCCAAAATGCAGGTATCCCCGTTCTCAAC
CACATCATCAACGGTGTTATTCTGACCTCTGCCTGGTCCTCTGGAAACTCCTTCCTGTTT
GCAGGCTCGCGAACACTCTACTCCCTAGCCTGCCAGGGAGAGGCGCCTCAAATTTTCACA
AAGTGCTCCAAAAACGGTGTTCCTTACTACTGTGTAGCCATCACAGCTGCTGTTGGCTGC
CTGGCCTTCCTTAACGTCTCCGCCTCCTCCGCTAACGCCTTCAACTGGCTTTCCAACCTG
TCCACAATTTCGGGCTTCTTGGCTTGGATCTGCGTGCTTATTGCTATGCTTCGATTCCGA
AAGGCCGTTGCCTTCAACGACATCACGCTTCCATTCAAAACCCCAGGACAGCCCTACACG
ACTATTGTTGTTTTGGCCTTTATTTCCCTCCTTACTCTGACGAACGGATTCACTGTATTT
GTTGGAGGATCCTTCACCGGCGCTGATTTCGTTGCGGCTTACATCACAATCCCTCTGTTC
CTCGTCCTCTACCTTGGACATCGATTTGGCTACAAGAGAGCAGGCCTTAAGACCACCTGG
TGGAGATCGATCCCCGAAATCGATATGGTCTCAGGTCTCGCAGAGTGCGAGAAGACTGAG
CTACTGACTCCAGAGCGAAAGCCGCGAAATTGGCTTGAGAAGGTCTGGTTCTGGATCGCT
TAGTAGTAGCACATCAATCACCACCTACGTATGTACTGTAGTCAATAAATTATTTATGAG
TTTTAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15422g_CDS-001

Protein length: 541 aa.
Product: Proline permease, putative

>YALI0D15422g_CDS-001 MDKTFSVTVEPSPSPSDLEYGEVKHTTKRALKSRHVQLIALGGCIGTGLFIGSGTILSSS
GPGSMLCAYIVMSFVIWTVMNALGEMTTFLPIDGASPPMYVNRFVDDSLAFACGWNYWYA
YAILVAAEVTAAAIIFEYWTSAVHSAVWITIVLVTCVLLNIIAVAIFGETEFWFASIKII
GILGLIIVGIVIFFGGGPKHDRLGFRYWKDGKAFLPYIIDGAGGRFCGFWSAIIRSGFSF
ILSPELVTISAGETEAPRRNIPKATRRFAYRLIFFYICGSLVIGTIVSSDDPLLLNKKNE
DASASPFVIGIQNAGIPVLNHIINGVILTSAWSSGNSFLFAGSRTLYSLACQGEAPQIFT
KCSKNGVPYYCVAITAAVGCLAFLNVSASSANAFNWLSNLSTISGFLAWICVLIAMLRFR
KAVAFNDITLPFKTPGQPYTTIVVLAFISLLTLTNGFTVFVGGSFTGADFVAAYITIPLF
LVLYLGHRFGYKRAGLKTTWWRSIPEIDMVSGLAECEKTELLTPERKPRNWLEKVWFWIA
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG