YALI0D14476g - TPS2

Overview

Description uniprot|Q6C939 Yarrowia lipolytica YALI0D14476g TPS2 Alpha-trehalose-phosphate synthase
Locus type CDS
Gene name TPS2
Locus tag YALI0D14476g

Location

Species Yarrowia lipolytica Positions 1761596..1764095
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2500 (nuc.)
Previous locus YALI0D14454g Next locus YALI0D14498g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14476g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14476gYALI0D14476g_mRNA-001YALI0D14476g_CDS-001

Nucleotide sequence

 

>YALI0D14476g
ATGCTACCGGAAATCATCACCCCAACCGCGGCGAGAGCGCTCAATGTGCCCATATCTGGA
CGGGTCATCAACTGTGTCACGACCCTGCCGTACGAAATCTACCGCGAGGGAGCGACGTAC
AAAATTCGACCGCGACGTGGCAACTCGGCCCTCTACTCGGCGCTGGATTATATGCAGTCT
GGCGACGGAGACACCACATGGACATCGTCGCTGGTGGCGTGGACGGGCGAAATCGCGCTG
CCGGCCGCCACGTCGCTGCCAGACCTGGAGCTGTATCAGAAGCTCACGGAGCAGGACAAA
CACATGCTCGAACGGGAGCTGACCGAGGCGCAGGGCGGCACGCCGACTCACCCGATCTGG
ACAGACTCGGGCGACACCGTGTCCACGGGCTACAACGAACAGCTGTCGCCCACCCGCCGC
TACGCAGAAAACATTCTGTGGCCCATTCTGCACTACATCCAGGGCGAACCCACCGACGGG
CGCGACGAGAAAAAATGGTGGAGCGACTACGAAGACCTCAACCGCAAGTACTGCGACAAG
GTTCTGGACATCTACAACGAGGGCGACGTCATCTGGATCCACGACTACTACCTGTTCCTG
TTGCCCAAAATGATCCGCGAAAAGCTGCCCGACGCCCGGATCGGCTTCTTCATGCATGCG
CCGTTCCCGTCGTCAGAGTACTTTCGGTGTCTGGCAAAGCGCCAGGAGCTGCTGCAGGGC
GTGCTGGCGTCGAATCTCATTTCCACCCAGAGCGAGGCCCACAAACGGCACTTTATGAGC
GCATGTTCCCGCATTGTGGGCGCAGAAACAGCCACGCCAACGTCCGTCTATGCCTACGGC
CAGTCCGTGTCCGTGGTCGCTCTGCCAATCGGCATCGACACGGCAAAGGTGGAGGCGGAC
GCCTTCACTGATGAAATAACGGAAAAAGTGCGGGCGATTCGGCAGCTGTACCCCGACAAG
AAGATCATTGTGGGCCGAGACCGGCTGGATTCGGTCCGGGGCGTGGTGCAGAAGTTGTAT
GCGTTCGACGTGTTTCTCAAACGGTACCCCGAGTGGCGGGATCGCGTGGTACTGGTGCAG
GTGACGTCACATACCGCCACAGGCACGCGCAAAGTCGAAAAGAAGGTGGCCGAGCTGGTG
TCATCCATAAACGGCAGATATGGTGCCATCCACTTTTCGCCAGTGCATCATTACACCAAG
CACATTGCTCGCGAGGAGTATCTGGCTCTGTTGCGAGTGGCGGACCTTTGTCTCATCACT
TCGGTTCGTGATGGCATGAACACCACTGCCTTGGAGTTTATTGTGTGCCAAAACGGCAAC
AACTCTCCGTTGATTCTGTCCGAGTTCACGGGATCGGCCGGAAACCTGCCTGGCGCGATT
CTGGTGAACCCCTGGGACGCTGTTGGGGTTGCAGAGCAGATCAACCGGACATTCCGAATG
GGCCAGGACGAGAAGCTGGCGATCGAGCAACCGCTGTACCAGCGGGTGACCGCCAACACG
GTGCAGCACTGGGTGAACCGGTTTGTATCGCAGGTGATCAGCAACACCTTCCGAACCGAC
CAGTCTCATCTGACGCCGATTCTCGACAATCACAAACTTGTGGAGCGGTTCAAGATGGCC
AAAAAGCGAGTGTTTTTGTTTGATTATGACGGCACTCTCACGCCCATTGTGACGGACCCT
GCCGCTGCCACTCCTTCAGACGGTCTGAAGCGGGACCTTCGAGCGCTGGCCAAGGACCCC
CGGAACGCCATATGGATAATTTCCGGCCGTGACTCCACGTTCCTGGACAAGTGGCTCGGC
GATATTGCTGAACTTGGCATGTCTGCCGAGCATGGCTGTTTCATGAAGAATCCAGGCACC
ACCGACTGGGAGAACTTGGCAGCCAACTTTGACATGAGCTGGCAGAAGGACGTGAACGAC
ATTTTCCAATACTACACGGAGCGGACACAGGGGTCGCACATTGAACGCAAGCGTGTGGCT
CTGACATGGCACTACCGACGAGCAGACCCTGAATTTGGGCTGTTTCAGGCCCGGGAGTGC
CGGGCACATCTGGAGCAGGCGGTGGTGCCCAAGTGGGACGTGGAGGTGATGAGCGGCAAG
GCCAATCTTGAAGTACGGCCCAAGTCGGTCAACAAGGGTGAGATTGTCAAACGGCTCATT
TCTGAGTACTCATCAGAGGGCCGGCCCCCGCAGTTTGTCCTGTGTATGGGTGACGACCAG
ACGGACGAGGACATGTTCAAGGCTCTCAAGGATGTACCTGATTTGGACAGCGAGAGCATT
TTCCCCGTAATGATTGGGCCTCCGGAGAAGAAGACCACCGCCAGCTGGCACCTGCTGGAG
CCCAAGGGCGTCCTGGAGACGTTGAATGAGCTGGCCAAGTTGGAGGGCGAGAGTAAGATG
TAGGTGAAGACGATAGGAAGATATCGCAATCACTTACCCTGCAAGCAAGACTAATAGTCG
AGATTTAGATAGCATGAATAGAATGATAGAACGATGTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14476g_CDS-001

Protein length: 801 aa.
Product: Alpha-trehalose-phosphate synthase
Gene: TPS2

>YALI0D14476g_CDS-001 MLPEIITPTAARALNVPISGRVINCVTTLPYEIYREGATYKIRPRRGNSALYSALDYMQS
GDGDTTWTSSLVAWTGEIALPAATSLPDLELYQKLTEQDKHMLERELTEAQGGTPTHPIW
TDSGDTVSTGYNEQLSPTRRYAENILWPILHYIQGEPTDGRDEKKWWSDYEDLNRKYCDK
VLDIYNEGDVIWIHDYYLFLLPKMIREKLPDARIGFFMHAPFPSSEYFRCLAKRQELLQG
VLASNLISTQSEAHKRHFMSACSRIVGAETATPTSVYAYGQSVSVVALPIGIDTAKVEAD
AFTDEITEKVRAIRQLYPDKKIIVGRDRLDSVRGVVQKLYAFDVFLKRYPEWRDRVVLVQ
VTSHTATGTRKVEKKVAELVSSINGRYGAIHFSPVHHYTKHIAREEYLALLRVADLCLIT
SVRDGMNTTALEFIVCQNGNNSPLILSEFTGSAGNLPGAILVNPWDAVGVAEQINRTFRM
GQDEKLAIEQPLYQRVTANTVQHWVNRFVSQVISNTFRTDQSHLTPILDNHKLVERFKMA
KKRVFLFDYDGTLTPIVTDPAAATPSDGLKRDLRALAKDPRNAIWIISGRDSTFLDKWLG
DIAELGMSAEHGCFMKNPGTTDWENLAANFDMSWQKDVNDIFQYYTERTQGSHIERKRVA
LTWHYRRADPEFGLFQARECRAHLEQAVVPKWDVEVMSGKANLEVRPKSVNKGEIVKRLI
SEYSSEGRPPQFVLCMGDDQTDEDMFKALKDVPDLDSESIFPVMIGPPEKKTTASWHLLE
PKGVLETLNELAKLEGESKM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG