YALI0D14454g

Overview

Description weakly similar to uniprot|Q0ULN6 Phaeosphaeria nodorum hypothetical protein SNOG_07328
Locus type CDS
Locus tag YALI0D14454g

Location

Species Yarrowia lipolytica Positions 1758871..1760277
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1407 (nuc.)
Previous locus YALI0D14432g Next locus YALI0D14476g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14454g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14454gYALI0D14454g_mRNA-001YALI0D14454g_CDS-001

Nucleotide sequence

 

>YALI0D14454g
ATGCGAATATCAATCCCGCCGGTGACTCGCACATTGCTCGGACTGACCGTTTTCTCGTCG
CTTCTGGTGCTCTCGCTGCGATATCTCGCCTACATCAGCCTGCCCGACCCCCATGACGTG
GTGGTCCCCTGGATCCAGCTGGTGCCCACGTTGTCGGTCATGTACCCCTGGACGCTGCTG
ACGGCCACGTTTGTCGAGACCAACCTCTTTTCGGGCCTGCTGCAGCTCTCCACGCTGTGG
TTTGGAGGAGCCTACTGTGAAAGCGTGTGGTCCAGCCGTGGCCTGGTCAAGTTTGTCGTC
ATCCAGGCGGTGGTGCCCAACGTGCTTGCGGTGCTGTGCGCGGTGGCGTTCTTCTGGCTC
ACCCAGCGACCCGAGGAACTCATGGTCGACTTCAGCGGCGGCACCGCCATTGTGTCGGGC
TTCATTGTTGCCTTCAAACAGCTGGCTCCCGAACACCGCATTGTGCTGTTCAGAGGTCTG
GTCAAGTTCCGTGTGCTGCATCTGCCGCTCATCTTTCTCGTGGCCAATACGCTTCTGGGT
CTGCTGTCGTCGGTCTACGTGATCCACGCCTGGGGTGGTTTTTTTGTCGCGTGGGTCTAT
CTGCGGTTCCTCAAGATCTCCTACGCCGATCCGGTACTGCCGTTTTCGGGCAGCTCGTCC
AATGCGGCCAACGCAACCCATCACAACCCCCACGGAGTGCGGGTCAGAGGAGACGCCGGC
GATGCGTTTGCGCTCGACCAGTTTTTCCCCGAGCCCATGGCTTTTGTGGTGCGCAAGGTG
TCGTACCCGGTGTGGTCGGTGCTGGTCAAGCTGGGGGTCAAGCCGTTTGAACAGAGCGAG
ATCGACTCGTCAAACCAGCGGTACCAGAGCAAGCGGGCTGCGGCCATCCAACAGCCCACA
TGGCGGTTTGGGGTGGCCCAAGAGCTGCAGCAGACCCAAAATACCCGTGCTGAGGCGGAG
CGACGGCGCCAGCTGGCCCTCAGAGCCTTGGACGAGAGAATGGGAAAGTAGAGCCGAGGG
AATGGGAAAGGACTGCTGTGGTATCGATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGATCCTCATGAAGCGCATACTGTCAGTTG
CTCACTTTATTGACTACAGAGTCGACCAAGCTGGAGGATTAATAACCACGAGTCCTGGAA
CAACAGTCTGAACCACTGTTGCCGTGACAGCTATGACTGCAATGACTGCAATGATTGCAA
TGACTGCAATGACTGCAATGATTACAATGACAGTGAATGGGGAGACTTCAACTGGAGAGA
CTGCCGGAGCCGTTGTCTATCGTCGACAAGGACGAGTGACATATTTATAGAGCCGAAAAT
ACATTGTATATACATGTCTGAAGTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14454g_CDS-001

Protein length: 337 aa.
Product: Conserved hypothetical protein

>YALI0D14454g_CDS-001 MRISIPPVTRTLLGLTVFSSLLVLSLRYLAYISLPDPHDVVVPWIQLVPTLSVMYPWTLL
TATFVETNLFSGLLQLSTLWFGGAYCESVWSSRGLVKFVVIQAVVPNVLAVLCAVAFFWL
TQRPEELMVDFSGGTAIVSGFIVAFKQLAPEHRIVLFRGLVKFRVLHLPLIFLVANTLLG
LLSSVYVIHAWGGFFVAWVYLRFLKISYADPVLPFSGSSSNAANATHHNPHGVRVRGDAG
DAFALDQFFPEPMAFVVRKVSYPVWSVLVKLGVKPFEQSEIDSSNQRYQSKRAAAIQQPT
WRFGVAQELQQTQNTRAEAERRRQLALRALDERMGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG