YALI0D14410g

Overview

Description weakly similar to uniprot|B9WGH8 Candida dubliniensis Putative enhancer of mRNA-decapping protein
Locus type CDS
Locus tag YALI0D14410g

Location

Species Yarrowia lipolytica Positions 1754184..1756041
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1858 (nuc.)
Previous locus YALI0D14388g Next locus YALI0D14432g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14410g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14410gYALI0D14410g_mRNA-001YALI0D14410g_CDS-001

Nucleotide sequence

 

>YALI0D14410g
ATGAGCAACTTTGTGGGACTCTATGTCCGGGTAACTACAGCCGATGGTCTCCGCGAGGGA
CTTGTTACCAAGGTCGAAAACGGTATGCTGTCGTTACGGACACAAAATGGACCCGTCAAC
CTGCCTGGCGATGCCATCAAGTCGTTGAATGTCATTGAGCGCGGCCAGCAGGAGCTCCAG
CTGCCTGATCCACGACAGCATCAGGCCCAGACCCAGCCCCAGATCCAGAACCGACAGCCC
CAAACACAACCCCCGTCACGATCTGGGTCACATGCCCAGCAGCCCCGATCTGGGTCACAG
ACCCGATCTGGTCCCCCCGGTCAGCAGGGCGGGGCCCCCGGCGGCGCACCCGGAAGCTCC
GGGTTCTCCGTCAACTCTCTGTTTGACGCACATCGAGCCGAGATGAGCGGGTTCTCCCAT
AACCATCCCCACGCTCCCAAGCCCCCCAAGGCGTCGTCTGGCTACGAGTCGTCGTCGTCT
CTGTCGGACCAGGAGCTCGTGTCACGTGTCAAGCAGCTCAACCGCAAGAAGAAAAACAAC
CATAAACACAACTCCAATGCCCCCCACAACAATAGCAACTACAACGCCGACTGGGAAACC
GATACCTCCTTCACTGGCGACTTTGACTTCCAGGCCAACCTGCAGAAGTTTGACAAGCAG
CAGGTCTTTGACGAGATCCGAGAATGTGACAACGTGCCTGTAGAGCAACGGCTGGTGTCG
CACAACAAAAATACGCCTCATAAGACCCATGCCAAGAAGCACGACTTTGCTGCCAACGCC
GGAAAGGTGCCCCACAACGAAATGGTGCTTAAGCCAGTCACAGCTCAGAGCCGGTGGATC
GAAGACAATCAAGAGGAAGACGAAGACGATGAGTACGACGACGAAGATGGTGGAGACCGG
GTCACAACCCACTTTGTGTCGCTGTCCGACTCGTCCCACATCCCCGTGGCATCCGAGGAT
CAATACAACGATGTCATGCGGCTAGTCACCCCCTTCATGGCTTCTCTGATCGAGAACTGT
GGCCTCAAGCTCGCTGAGCTGGTGATCCGATTGTCTGGCGGCAACGCCAGGTTTGGGTCC
TCGTCCAACTTTAACCCTCTTCCCTTTTGTGTGGTGTTGGTTGGCGACTCCGAGGCCGGC
AAGAAGGCCCTTTCTGCAGCCTCCCATCTTTCCAACCACGGTCTCAAGGTGGTTGCGCTC
CTCATCAAGCCCCGCGAAAGCTACGATCCGTCGTTTGAGCTGAAGTTCAACTTCTTCGAG
CTCTGCTACGGTAAGGTGGTGGTCTCTGTGGCCGATTTCACCCAGCTGGCTCGAAAGAAC
AAGCTGGGAGCCCCTGAAGTGGCGATTCTGTCGGCCGAAATCGCGCAGGCCCAGACTCAG
TCCGTCTTTGACGCCAAGACCACTCTGGTTTGTGTCGACGAGGACTACGTGTCCAAGTCC
AAGGCTGTTCTTGTCAGCACCGGCATTCCTCTGGAGGACACCCTCCAGTCCAAGCATACC
CACTATTTGATCGATATGGGTCTTCCGCAAAAGATTTTTGAGATTGAGCGGTTCAAGCCG
CTGACCATCACTTGGGGAGGGGAGTGGTGTGTGCAGTTGGAGCAGCGATAGTTGGCGTCA
AGGAGAAAAGCTGCGGGGCTGTATTGGTCCCCTTGTCTCACCTTATCTCCCTTACCCTGT
CTCTGTCTCTCTGGCTGTGAGATACAGCATGTGCAGCATTTCCCGGGGTGTTTGCGTAAG
CTCGAAACGTTTTGTCAGATCTCTATGAGGCACACAACCAGCGCCATCTTCTGATAATGA
GTTTTTCAAGCAGATCTGAGACGTGAGTGGTATTTAGTGAATTGATGATGTTATGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14410g_CDS-001

Protein length: 537 aa.
Product: Conserved hypothetical protein

>YALI0D14410g_CDS-001 MSNFVGLYVRVTTADGLREGLVTKVENGMLSLRTQNGPVNLPGDAIKSLNVIERGQQELQ
LPDPRQHQAQTQPQIQNRQPQTQPPSRSGSHAQQPRSGSQTRSGPPGQQGGAPGGAPGSS
GFSVNSLFDAHRAEMSGFSHNHPHAPKPPKASSGYESSSSLSDQELVSRVKQLNRKKKNN
HKHNSNAPHNNSNYNADWETDTSFTGDFDFQANLQKFDKQQVFDEIRECDNVPVEQRLVS
HNKNTPHKTHAKKHDFAANAGKVPHNEMVLKPVTAQSRWIEDNQEEDEDDEYDDEDGGDR
VTTHFVSLSDSSHIPVASEDQYNDVMRLVTPFMASLIENCGLKLAELVIRLSGGNARFGS
SSNFNPLPFCVVLVGDSEAGKKALSAASHLSNHGLKVVALLIKPRESYDPSFELKFNFFE
LCYGKVVVSVADFTQLARKNKLGAPEVAILSAEIAQAQTQSVFDAKTTLVCVDEDYVSKS
KAVLVSTGIPLEDTLQSKHTHYLIDMGLPQKIFEIERFKPLTITWGGEWCVQLEQR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG