YALI0D14388g

Overview

Description weakly similar to uniprot|Q6C944 Yarrowia lipolytica YALI0D14366g
Locus type CDS
Locus tag YALI0D14388g

Location

Species Yarrowia lipolytica Positions 1752010..1754080
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2071 (nuc.)
Previous locus YALI0D14366g Next locus YALI0D14410g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14388g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14388gYALI0D14388g_mRNA-001YALI0D14388g_CDS-001

Nucleotide sequence

 

>YALI0D14388g
ATGTCCTTACCACTCGACATTTGGCTCATTGTTCTGCAATACACAGATCTGGCCAGCACT
CTAACTTTGGGTCACGTGAACACCGAGTTCCACGCGTTGCTGCGGTCCCGTGACTTCGAG
CCGGCACTGAGAGGGAAGGTGCAGTCTGTGTGCCCGTTTATCCAGCCCGGGGAGGACGGA
ATTGAGCCGGGAACGTGGTACGAGTGCAGCGGCGTCGTACAGCGGAGGATCGGGCTTAGT
GAGCAGGAATCATCACGTGATTCCTCTTCGTCCAACCACGGATATGTTCCTCTGGAGCAG
TTCATTTCCACTTTACACAATCACAGTGACGACGAAGAGGAGGAGGAACACGTGATTTGC
CGTGACATGACATATGAGTTGGAAGACTTTGAAGATGCCTCCGAGGTTGATTTTCTGTAC
GACTCCGAGTCTCGTCTGGCAGTGGATGTTCCTCTTAAAAACAGTCATGAGCAGATCTTG
AACAAGTCCGGGTTTCTGGGGAAAACGGACATTTCCATCTACAACAACTTTTCAGAGCTT
GTCTACCAATGGCAGGATCACTTTTTCATAGTCAAATGGAACGAGCACATGTCGTTGGAT
CTGGACGATTGCTATGCCTTCAATTTGGACATGGAAGGAGGAAGTGAGATATGGTACACG
GTGCTTCAGTTGTCTGGGATGACTCTCATCATGAAAGCATATACCGATTTCACCAGTCCG
ATCGGAATCGAACGAAAGCATCATTATACGCTGTATCGGGTGGATTTCGAGAGGAGACGG
CTTCAGGAGTTGTTTTCGTCGTTCCAGGTGTCATCTGATCTCATTGGCATTTTCAACATA
ACCGAGTACAATGGGTTTCTGTGGGTGGGACTGGGAACCAAGGTCACGTTTCCATTGTTC
CTCTATTACGACGAAAATGACAAATGCCATGTCTATGTGTGCACGAGTCAGGTGATCAGA
GCTTCAGCCTATCAGTACTCCGCTGTTGAAACGAGCACCAAGAACTCGTTGAGTCACATT
CCCGTGACTGTACCCCACCGAACCAGTCTGTCCATGCGACCGAGGCACAGAAGGTACGTG
TTAGTCTCTTTCAACCCAGAGTATCGGTGCAAGTTGGTGGTTGACTTGGCTACGGGGGTC
CGGATTCAATGCGAGGAGCTGGAGGAGGACTTTTCGTTTGGAATTAGTCCGGCGTTGGTC
GAGGGGCGGTTGGAGTTCATTTCGTCCATTTAGGGGAAGGCAAAAGCGCACCTTGGCATG
AGGGTATCTTAAGAATCCCATCAACCCACATGTACCAATGGAGACAGTTGACGACTCGAA
ACGCTACTTTTCAGCTCAGAGTGCCGGCATCGTGGCAATGTTCCTGGATTGGGGGGCAGT
GGTTGTACTCCTGGTGGCATGTTGAGCCCATGAAAAGAAAGGACACAACTGGAGTGCATT
CACTTTTGCAATGGCCATTTCAGATGTCACATTGCTGTCAGAACCACTTCCAGTCTCGAT
CAAATCTTTTTGGTCCCCTTTTTCATCAACTGCAATACTCATGGGGCGCGGTCAAGTAAC
GACTGAAAAGTACATGTCTGTCAGCTTCTACGTCAAAGTCTCTACTTGGAATATTTGAAC
ATATTTCACTTATCATATTCGACTTAAACATCACTGGAACATGTCCAAGTTCTTTCAAGC
ATCTCAACTGGAAGAAAAAGACTTGAAACAAGAAAGAAACTTGGCAGAAGACATCAAAAG
GTTGTAAATATCAACTATCCACTCCCCCGCCAGCTTGGCCGCTTTGATACAACGTCTTAC
TGCTCCAAACTGTCCAATCCACCCGAATTCCCCCACCAAAAGACTTGGCGTCATGCTAGC
GCATTGGATTTCGGCTTCTTCAATACAAACGACGCTCTCAATAGGCTGCGGGTTGGAGTT
CTGTTGTCCTCTTCTGCCACCGTGGCTTCTACCGCCGTCATAGCTCACATTTTAGGTGGG
CTGTCTCAGCTTTAGGTGATGACTAATTGGAGCTATATAATACATACAAATAACATCAAT
AAAACGAGGTGGGGCACCCAGTCGATAAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14388g_CDS-001

Protein length: 411 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0D14388g_CDS-001 MSLPLDIWLIVLQYTDLASTLTLGHVNTEFHALLRSRDFEPALRGKVQSVCPFIQPGEDG
IEPGTWYECSGVVQRRIGLSEQESSRDSSSSNHGYVPLEQFISTLHNHSDDEEEEEHVIC
RDMTYELEDFEDASEVDFLYDSESRLAVDVPLKNSHEQILNKSGFLGKTDISIYNNFSEL
VYQWQDHFFIVKWNEHMSLDLDDCYAFNLDMEGGSEIWYTVLQLSGMTLIMKAYTDFTSP
IGIERKHHYTLYRVDFERRRLQELFSSFQVSSDLIGIFNITEYNGFLWVGLGTKVTFPLF
LYYDENDKCHVYVCTSQVIRASAYQYSAVETSTKNSLSHIPVTVPHRTSLSMRPRHRRYV
LVSFNPEYRCKLVVDLATGVRIQCEELEEDFSFGISPALVEGRLEFISSI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG