YALI0D13904g

Overview

Description similar to uniprot|P08638 Saccharomyces cerevisiae YLR451w LEU3 transcription factor
Locus type CDS
Locus tag YALI0D13904g

Location

Species Yarrowia lipolytica Positions 1721996..1724515
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2520 (nuc.)
Previous locus YALI0D13882g Next locus YALI0D13926r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13904g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13904gYALI0D13904g_mRNA-001YALI0D13904g_CDS-001

Nucleotide sequence

 

>YALI0D13904g
ATGTCGGTCAAACGTGAATCTTCAGATAGTCCCGGGGTCCAGACAAAGGACAAGCGGCTT
GCATGTGTCGAATGTCGGCAGCAAAAGGTCAAATGCGACGGCCAGGAGGGCTCCGACTGC
TCTCGATGCAAGCGAAAGGGCATTCCTTGCGTGGTGCAAAAGGGGTTCAAACGAACGTAT
AAGAGAGCGCAATTAGCGAGCTTGGAGGGGGAGATGGAGCGCCTGAAGCGCGTTCTGGAC
GAGCAGGAACGGGCCAAAACCACGGCGTCCGCGCACCAGAGCGCCAGCTCCTTGCTGGAC
CTCAGCAACAGCGCGATCCACTACGCAGTGCCGGTGGGGGTGGAGGAGACGGGGGGTGAA
GGACAACATTCTTCCAGAATAGGAAGTGCAGATACCGGAATGGGTAACTCGGATACCTCA
TTAGGAAATGCAGATACCCAATTGGGACAAATGGGCCAAATGGGCCCCGGCCACTCAGAG
ACCCGCAACCTGCCGTCGCCAAAATTCAAACCGACCCCGTTGCCGGCGGTGGAGTCACGT
GATACGCCCGAGGCCGCGCCCATCCCCTCGTGTGTCAAGCCCAAGACCATTCACGAGGTG
ACTCTTTCGGTGCCGACCGTCAATGCTCTGTTCAAGGAGTTTGTCGACCATTATCATCCC
ATTTTGCCCATTGTCAATCTGCAGGGAGGCCCCGAGCACATCTACAGACAATGTCCGTCC
TTGTTTTGGACCATCATGTTGGTAGCTTCCAGACGGTATGCTGACGATGATACCCTTCTT
CTCCGTCTCACAGAACCCGTCAAGGCATGTCTTGCAGAAGTCACCATTTCGCCAATCACC
CGCTATGTGGCCTCCAATTCCCAGGTCCCCATTCTCAATATTGCCTCTGTGCACTCGGTT
CAGGCGTTTCTGGTGTATACCATGTGGCCTCCTGTGACGTCTTCGTTGTCGGCCGATTCG
TCGTGGAACACGTGTGGAGTGGCGCTGTTCTCGGCCATCAAGATCGGACTCCATTGTCCT
GGGTATGCACGTGACTTTTCACGTATCAAAACGGCCTCTTCCAACTCGCTGTATCCGCAG
ATTTCCGAACAGATTCGAACCTGGATCGCATGCAACATTGTGTCCCAGACAGTAGCCACG
GTGATGGGGTTCCCGGCCTTTGCTAACTTCGATTCGTCCATTTTGAGCGCCTGCTCGAGC
GATTCTTCCGTCGTCAATGTGCCCGAGTCGCTCAAACAAATGTGTCTCTTGTCTCAACTG
GACCAGCAGATTGAAAAGACGCTCAATAGCAACTCCAAGGACCCGCTGGGGCTCTGCCAG
AGCACAGAACGACTTTCTCTTATCAGCATCATCTCTCGAAGACTCGATCGAGTGGAGACT
GAGGCCAATGAGTACGATCCTCTGAGACGCTTCCTGTTTCTCAGCGTCCGAGTGAGACTG
TACATTTACTACTATCTGGACAATATGGACTTTAGCGACATTCAGCTGCAAAAGGGACTG
GTCCAGCTATACAACGCGAGCCTGGAGTTCCTCGACCACGTCACCTCCGTGCACGCCCGT
GACCCATCCTTCATCAAGTATCTTCCTGGTGTCTACACGCAGCAGATTTGGCAGACTCTG
TGTGTGATCATCAAGATTATTCATTCCTCTTTGAATGAGTTTATCGACACTTCTTCGGGC
AAAAAGCTGTTTGATGAGTGTCTCAAGCTGCTTGAAAATGCGTCGATTTTGAAGCATGAC
ATGGCGTACCGAGCGTCTGAAATCACCTACCAGCTCTGGCATCTCTACGCCACTTTGCAC
AAAAGTGGCCGCACCTCTACCAAGGTCAATATTCGAACCCGTTTGTCTGCGTCTGTCTTC
TTTGACTGTCTGTGGACTATGAGAGAAGAGTGTGGCATCCGGTCCATGGCTCCCTCGGTG
CTCACACAGGTGTACAGACAGGGTAACCAGCCTGCGGGGGTCAAGCAGCTGTTTACCAAC
ATTCCTTTGGACCCCAAACCTCGTTTGGCTACAGAATTGCCCATCCATCATCCTCAGGGC
TCTTCCACGTATCCCGTTCATCCTGCAAGTGCTTCTTCGGGTGTGGAGAGTGATGGGGAT
CATTCTCAGAGCTCGGCTGTTTCTGGCACTCGAACTCCACATCTTTCTTCTTCTCCGTCG
GAAAACAGAGCCAAGAGAATCAGGCTGAATTCCAGCTCCAGTGATGGGAAGGAGGGCAGA
AAGATTGTGTCTGAGCAGCTCAATGACAACTCGGCCTGGTTCGATACCCAGGGCATGGAC
AACTGGGATCTGGATAGCATTTTCAAGGATGTGGATTCCATCATGAACGATTTCGGTTTC
AGAGCGGATGAGGCCGGCGTGGCCGTGAATGAATAAAGGGGGTTGTGGTGTACCACAACA
GCAATTGAGGGTATTGTCAGCGATTGGGGACATTGCCATGGTTCAGAGGCCCCGGATCCG
GCCACGAGCATTATAGACACACGTGTCTGGTGATAGATGATAAATGTACATTAGTTAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13904g_CDS-001

Protein length: 792 aa.
Product: Zinc-knuckle transcription factor, repressor and activator, putative

>YALI0D13904g_CDS-001 MSVKRESSDSPGVQTKDKRLACVECRQQKVKCDGQEGSDCSRCKRKGIPCVVQKGFKRTY
KRAQLASLEGEMERLKRVLDEQERAKTTASAHQSASSLLDLSNSAIHYAVPVGVEETGGE
GQHSSRIGSADTGMGNSDTSLGNADTQLGQMGQMGPGHSETRNLPSPKFKPTPLPAVESR
DTPEAAPIPSCVKPKTIHEVTLSVPTVNALFKEFVDHYHPILPIVNLQGGPEHIYRQCPS
LFWTIMLVASRRYADDDTLLLRLTEPVKACLAEVTISPITRYVASNSQVPILNIASVHSV
QAFLVYTMWPPVTSSLSADSSWNTCGVALFSAIKIGLHCPGYARDFSRIKTASSNSLYPQ
ISEQIRTWIACNIVSQTVATVMGFPAFANFDSSILSACSSDSSVVNVPESLKQMCLLSQL
DQQIEKTLNSNSKDPLGLCQSTERLSLISIISRRLDRVETEANEYDPLRRFLFLSVRVRL
YIYYYLDNMDFSDIQLQKGLVQLYNASLEFLDHVTSVHARDPSFIKYLPGVYTQQIWQTL
CVIIKIIHSSLNEFIDTSSGKKLFDECLKLLENASILKHDMAYRASEITYQLWHLYATLH
KSGRTSTKVNIRTRLSASVFFDCLWTMREECGIRSMAPSVLTQVYRQGNQPAGVKQLFTN
IPLDPKPRLATELPIHHPQGSSTYPVHPASASSGVESDGDHSQSSAVSGTRTPHLSSSPS
ENRAKRIRLNSSSSDGKEGRKIVSEQLNDNSAWFDTQGMDNWDLDSIFKDVDSIMNDFGF
RADEAGVAVNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG