YALI0D13882g

Overview

Description highly similar to uniprot|P0CX53 Saccharomyces cerevisiae YEL054C (ohnolog of YDR418W) RPL12A Ribosomal Protein of the Large subunit
Locus type CDS
Locus tag YALI0D13882g

Location

Species Yarrowia lipolytica Positions 1719744..1720612
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 869 (nuc.)
Previous locus YALI0D13860g Next locus YALI0D13904g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13882g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13882gYALI0D13882g_mRNA-001YALI0D13882g_CDS-001

Nucleotide sequence

 

>YALI0D13882g
ATGCCTCCTAAGGTGAGTACCAGAGAGAGAGATATCGAAGGGCATGACGACCACGGCGAC
GACAACGGCGGATTCGCGGCGACATGAAATGGGCAGTTGAAGGGGTGGTACGGGCTATGT
TGATGGATCGAGTTGGGTGGAGAATTTTATGGAAAATTTGACCCTTATCCGATTTGATGA
TGGACTCGTGATGTCATCTTTGGATCCACCATAAGTGTTCAGTTTTGTTCAAAAGAATCA
GCTCCTTTCTGTCCAGTCTGTTCAGTTCACTTCAATCCGTCCACAACCCGTCAGTGTTCA
ATGTCATATATCGGACCCAATCCTACTGTACCCTGCTAACCCAGTTTGACCCCAATGAGG
TGAAGATCATCTACCTGCGAGCCATGGGTGGTGAGGTCGGAGCTTCCTCCGCTCTTGCTC
CCAAGATTGGTCCTCTCGGTCTGTCCCCCAAGAAGATTGGTGAGGATATCGCCAAGGCCA
CCAAGGCCCACAAGGGTGTCCGAGTCACTGTCCAGCTGACCATCCAGAACCGACAGGCCA
CCGTCTCCGTCGTCCCCTCTGCCTCTTCTCTGGTCATTGCTGCTCTCAAGGAGCCCCCGC
GTGACCGAAAGAAGGACAAGAACGTCAAGCACAACGGTAACATCCCCCTGGAGGAGATCA
TTGAGATTGCCCGAACCATGCGATCCAAGTCTTTCTCCAAGGAGCTGTCCGGAACCGTCA
AGGAGATTCTTGGTACTGCCCAGTCTGTTGGCGCCCGTGTCAACGGTAAGCCCGCTCACG
TCATGATTGATGCTATCAACAACGGCGAGCAGGACATCCCCGATAACTAAAGTTGTCGTA
AAAAATAAATTTGTTTATTATGAAAAAGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D13882g_CDS-001

Protein length: 166 aa.
Product: Ribosomal 60S subunit protein L12, putative

>YALI0D13882g_CDS-001 MPPKFDPNEVKIIYLRAMGGEVGASSALAPKIGPLGLSPKKIGEDIAKATKAHKGVRVTV
QLTIQNRQATVSVVPSASSLVIAALKEPPRDRKKDKNVKHNGNIPLEEIIEIARTMRSKS
FSKELSGTVKEILGTAQSVGARVNGKPAHVMIDAINNGEQDIPDN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG