YALI0D13728g

Overview

Description similar to uniprot|P0CX32 Saccharomyces cerevisiae YIL069C (ohnolog of YER074W) RP50B 40S small subunit ribosomal protein S24.e
Locus type CDS
Locus tag YALI0D13728g

Location

Species Yarrowia lipolytica Positions 1702673..1703450
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 778 (nuc.)
Previous locus YALI0D13717r Next locus YALI0D13750g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13728g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13728gYALI0D13728g_mRNA-001YALI0D13728g_CDS-001

Nucleotide sequence

 

>YALI0D13728g
ATGGTGAGTGAGATTCGACAATCAAGGGAGTGAGAGTGGCAGTGTTGTGTGGACCACGTT
GATGTTGTGTGGACCATGTTGCTGTTGTGTGGACGACATTGCTTGTGGGGAAACGGGACG
ACGACATTTGACCCACATTTGAGCATCATGTTGGGATGGGGGAATCGGGTTTAAAAGCAG
GGCGGCTTGGTGCTCTCTTCAATCTGACCAGTTTGTTGAGACCAAGCGTTTCCGCGAGAT
TCCTCTGGACGCTGCAAAAGAACCATCCAACCCTACTCGAGATAGGCCCTGTATAATCGT
TGCTAACCCAGGCCGACTCCGTCACAATCCGAACCAGAAAGTTCATCCGAAACCCCCTCC
TCGGCCGACGACAGTTTGTCGTTGACATTCTGCACCCCTCTTCCGCCAACGTGTCCAAGG
ACGAGCTCCGAGAGAAGCTGGCCGGTGCCTACAACTCCGAGAAGGACGCCGTCTCCGTCT
TTGGCCTCCGAACCCAGTTTGGTGGAGGAAAGACTACCGGTTTCGGTCTCATCTACGACT
CTCCCGAGGCTCTGCTCAAGTTTGAGCCCGCCTACCGACAGGTCCGATACGGCCTTGCCA
CCAAGGTCGAGAAGGCTTCTCGACAGCAGCGAAAGCAGCGAAAGAACAGAGACAAGAAGG
TCCGAGGAACCGGTGTCAAGCTCGCCGCCAAGAAGAAGAAGAAGGCCGAGTAAGCAGGTT
GGTATGTACGCCTACTAAAAAATGTTATTATATGCACAGCATGAGCCGGTATGAGTGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D13728g_CDS-001

Protein length: 135 aa.
Product: Ribosomal 40S subunit protein S24, putative

>YALI0D13728g_CDS-001 MADSVTIRTRKFIRNPLLGRRQFVVDILHPSSANVSKDELREKLAGAYNSEKDAVSVFGL
RTQFGGGKTTGFGLIYDSPEALLKFEPAYRQVRYGLATKVEKASRQQRKQRKNRDKKVRG
TGVKLAAKKKKKAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG