YALI0D13640g

Overview

Description similar to uniprot|P38887 Saccharomyces cerevisiae YHR202w
Locus type CDS
Locus tag YALI0D13640g

Location

Species Yarrowia lipolytica Positions 1684170..1686063
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1894 (nuc.)
Previous locus YALI0D13618g Next locus YALI0D13662g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13640g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13640gYALI0D13640g_mRNA-001YALI0D13640g_CDS-001

Nucleotide sequence

 

>YALI0D13640g
ATGAAACTGAATCTGGCAGTGCTGGCGCTGGCGGTGCATTCCGTGGCCTCAGCAGCTACG
GGCCAGCAGATTTTTGCACTCAAACGTCCCGACAGACGTGCTCTGACTCCCGGCGAGTAC
ACCTTTCTACAGACCACAGACACCCACGGCTGGTTTGAGCAGAGCGGTGAGACCTACTTT
GGCGACTGGGGCGATCTCGCCAGCTTCCACCAACACATGAAGAAAAAGTACCCGAATTTG
CTGTTTTTTGACTCGGGAGACAAGCATGATGGCAACGGGGTTTCGGACGCCTCTACCCCG
AGAGGCCACTATTCGCGACGGCTGTTTCGCGAAATGCCCTTTGACGCCGTCACGGTCGGA
AACCACGAGCTCTACAACACAGAGGTGGCCACGTTGGAGTACGAGGAGGTGTCACAGCAT
CTAGGAGACAAGTACCTTAGTGGTAACGTGGAGATTTGGAGAGGCGAATGGCGTCCCTAC
GGTAACCGATACAAGGTGATCGAGCGGTCGCATTACAAAGACGGCAAAACTCGTCGGATC
CTCACTTTTGGCTTCCTCTATGACTTTGACCTGCATCCCAATAACATTCGAGTCACCAAG
GTCAGAGATGCCGTCAAGCAGCAATGGTTTCTGGACGCTCTGGACAACGAGGAGTACGAC
GTGGTGGCGGTGATAGGCCACATTCCCCTACGATCATGGGAATTCCCTCAGCTGATTGAG
GCCATCAGAAAGCGAACAAAGAAGCCTCTGGTGCTGCTAGGTGGCCATTCTCACGTCAGA
GACGCCGTCCAGCTGAATGGAGAGTTTGACGGCCCCTCTGACGTGTACGGCATCCAGGGA
GGCCGGTTCCTGGAAACTCTGGGATGGCTGTCTCTTAATGTCACTGGTCAGGAGTCCACC
TCTTCGTCCCGGTCATATATTGATTTCCATATTGACGGTCTCAAGTTCCACGCCTCACAT
GACCCCGACCATTCCAAGTGGGACACCGCTTTGGGCAAGAGCCTTACTCGGCAGCTGAGC
CGCATCAAGAAGAAGCTCGATCTGAAAGAAGTGTATGGATGTGTGCCCGAAAACTATTAC
ACCAATGGCGCAAAATTCCCCGGGCCGTCTTCTCTGCTCAGTCTCATTGCTGACGAGGTG
CTCCCAACTCTGAATGGCACTGCCGAGGGAGCTACGGGTGACCGAGTGATTATCACCAAC
ACCGGCGGTCTGCGTTTCGATCTGCTCAAGGGCCCCTACACACGTAATACCGGCTTTGTG
GTGTCTCCTTTCCCCAATAACTGGGTATACCTTCCCAATATAGACATTCACACGGCCCAT
GACATTTTGCCGTACCTGAACCGAAAGGCGCATATTTTGGGAAGTGGTCACATGGTGCCT
GAGGAGATCCCCCAGGAGTGTGACATGTTCCATGCTGCAGACACCAAGGGCCTGTTGCCT
GGATACGTGACTCTGGACGACTACGGGCATGATGGAGATGATACTCCTCATTGGGCTCTT
CCTTACTACGAGCTTCCTAATGCCATTCAGACAGAGATGCCTCCGGACGACGTCAAGTAT
GTTGATCTGGTCTTCTACGACTTCATTGCCCCCTTTATTCAGGAGGCGCTGTATGCTCTT
GACCGGCCTGATTACTTTGAGCGGCTGACCGACTATGGAGGCAAGGGACTGAATGAGCTA
CTGAAGGACTACGCCGAGGAGCACTGGGAGTGTCGGTATTAGTTCCGACCTTTGCACTGG
CGCGTCGTCACACACTGCATAATGCTAATTACATGTATAAGATAACTGATATGGCTAAAA
CGACAGTACAGTACCGCTACTGGTACAAGTATGTGGCAGACTGATATGGTCTGCGATCCT
ACATATCTATAATTGGATGGAGATATGTTTGACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13640g_CDS-001

Protein length: 574 aa.
Product: Conserved hypothetical protein

>YALI0D13640g_CDS-001 MKLNLAVLALAVHSVASAATGQQIFALKRPDRRALTPGEYTFLQTTDTHGWFEQSGETYF
GDWGDLASFHQHMKKKYPNLLFFDSGDKHDGNGVSDASTPRGHYSRRLFREMPFDAVTVG
NHELYNTEVATLEYEEVSQHLGDKYLSGNVEIWRGEWRPYGNRYKVIERSHYKDGKTRRI
LTFGFLYDFDLHPNNIRVTKVRDAVKQQWFLDALDNEEYDVVAVIGHIPLRSWEFPQLIE
AIRKRTKKPLVLLGGHSHVRDAVQLNGEFDGPSDVYGIQGGRFLETLGWLSLNVTGQEST
SSSRSYIDFHIDGLKFHASHDPDHSKWDTALGKSLTRQLSRIKKKLDLKEVYGCVPENYY
TNGAKFPGPSSLLSLIADEVLPTLNGTAEGATGDRVIITNTGGLRFDLLKGPYTRNTGFV
VSPFPNNWVYLPNIDIHTAHDILPYLNRKAHILGSGHMVPEEIPQECDMFHAADTKGLLP
GYVTLDDYGHDGDDTPHWALPYYELPNAIQTEMPPDDVKYVDLVFYDFIAPFIQEALYAL
DRPDYFERLTDYGGKGLNELLKDYAEEHWECRY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG