YALI0D13618g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D13618g

Location

Species Yarrowia lipolytica Positions 1680950..1683919
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2970 (nuc.)
Previous locus YALI0D13596g Next locus YALI0D13640g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13618g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13618gYALI0D13618g_mRNA-001YALI0D13618g_CDS-001

Nucleotide sequence

 

>YALI0D13618g
ATGCCTCCGAAACGCCAATACTCTCACGGAGAGCGCGTCGGTCATATTCCTAACCGGCAA
TCAAACGTCGAGGACTATTTCAATCCCAATCACCCGCTTACACCTCCCGATACGAAGCGT
TCCAGGGCGAACGAGAGAAGACCTTCTGTTGCAGGACAAGGACGGGTGTTTGACAGCGGC
TTTGGGAATGCTTTTGAAGACGAGAAGACCGGGGGAGTTCGATTCTGGGACTCTGATCAG
TTGAACTTGAGTCCAGATAGTTCGCCTTTTCCTCCCGTGTCGCAGGACAGATACGGAGGT
GGTCAAGATCCTAGGGTTGAAGATGTTTCAGAAGGCGATCTGGACACTGATATCACTCTG
CCGGAAGACAGTGGCTATGTGAATCAGAGTCTGATAGCCAATCTGAAAGAGTCGAAAACA
ACTGCGGAGAGGGTATGGGCAAACGAGGACGATCTTGGGCCATTTGGAGAGCCGTACCTT
GTAGATCCCGAAGAGCCCACCGGGCCCAAGATTGAAAAGTCTGACGAGGCTTTCAACATG
ACAGTAGAGATGGCTCTAGCTGATTTCGAGGAAAAAAAACGTGCCTTTGAGCAGTCTCAA
AAGATTCTGCGGGATGTGCTTGAGAATTCCAAGAGCTGGGGCGAGTGTCCGAGTCCAGAT
AGACGGTACAACTCTGAGGTTCCTAACGGAACTCCGAAAGAAAAGTCTTCAGACAAGGTC
TATGTCTCGGTGCCGATTGAGGAACCTCCGCAGAGTGATTCGTTGGACCATGTTGGAGAC
CGGTTTGCAGATGCAGTTTGTCAGGGAAGTGTAGAAGAGGTGGGGGGTTCAGGGGAGCAG
AACTGTCCTCATCAGTTGACGTCTGGCCCTGCCTCGACTTCCAATTGTCGTCCCAGTCTA
AAAGAACAAGTCGAGAGCGAGGAAGCCATGCAGGGCCCCTGGAAGGTTCCTGCTGTTGAA
ACTGTTGAGCTGATCAAACAACTAAGGCGGGCTAAACTAGATGAGAACATCCAGCAGACT
GCAAAGGCTTCAAAGGCTTTTGCATCAAAGGTTCCTGCTTCAAAGGTTCCTGCTTCAAAG
TCTCCAGCTCTAAAAGTTGTGCAGGCCAAACAGGGCAGACGGGCCAATCCTGTCCGGGCG
GTTCGACAGAATCCACAGCCTCGAATAGTCGTTATCACTCCAGACACCGGAAGAGATTCG
GACGATATTTTAGACTACCCTTCTGAAGACGGCACTCACACGGAGTCTGGCAGTGGGTCT
GAGAGTGAATCTGTGTCTGGTCTGGAAGACGAGGACGACGAGATTCAGGTAGAGATTGGG
GACTTGTCTGATGAGTCGGAGTCCAACGAATCAACCAAGAGAAGCAGGTCCGTCAGGAAA
TCTTTCTCCAAACAGTATCCATTGGATGGTACAGATAGTGAACTGGAGGAGAATGAGAGT
GAGAGCGAGGGTGACCAAGAGGAGAGAGAGGACCAAGAGGAGAGAGAGGACGAGGAAGCC
AATGATACCCATTCCGACAAAAATAAATACGGTTCCGACGAATATGAAACCTATGGCGTC
ACTTCTCCGTGCTCAGAAACCATCCCTAGTGACTATCCTGAAGTGCCTCACGACGCCGAA
AACGAAGATACAAACGCAAACACGTCCATGTCCAGACACGAAGTGGAGGTGTCCTTCAAC
GAAGCCCTGTTCGAGATCGGTTCATTTCCTGAGTCTTCACAGAGTACAATGAACTCTTCC
AAGAATACCTCATTATCCAAGAATACCACATGTTCCAAAAAGACTTTTACTCTGGAGTGT
ATCGAGTACGTAGTTGAGCCGTTCACCACAGTCCATTGGTGGTTTGTGTGCCCACCTAAT
CCCCCAACTGCTGACGCTCCGATAATTGTCCAGACTCTGGTGGATATATGTACTCGAAAA
GTTGGTGAAAACTCGGACAGACTGCCTCCTCAGATGATTGCAGAATCCAAGAGAGGCTGG
GACTTTTGGGGGAACATCTGGAACGCCATCCTGGAGCACCACAAGGACACATTTGCCATT
TTTGTTTGTTTTGCGGCTGCTTTTGGCCATAGGGCACAGTTTTCGTGTCATTTGCAAGGC
GATAGTCGGCCTAAACACGTGATTACTTCTCACCATCGGCTGCAGCTGATTGAGGCTCCT
CCCGCAAAGAAGGACATCAGTTACCTGCAGTCGGTGCTCTCTCCGACCAAAGACGAAATC
CCGTTCAGAAACCATCTGATTTTGTCATACTCTGGCAAAAGAGTGGCCGAAAATGTGCTT
TCATCCCTGCCTACACTCAAGACCCTGTCTGTGTTGGATCTCCGGAGACTCGGAGTGTCT
TCTGGCAAGCTCACGCCATGGATCAACATGCTGAAACGGGGAGAATGGCCCCACATGAGA
GCCGTTCTAGTTGGTCCAGCTGAGAGTGAGAAAATGAAGGAGTTTTTGCAGTTTCCGGAA
ATGTGGTTTGTTGGTTATGAGCCGTTGGAGAAGGCTCCCAAAATCAAGGCAGGAGACATG
TGGTATCAGTGCACAACCAGGGACATCCTTGCCAAGGAGAAACGGTGGAATTTTCAGAAA
AGTGGTCTTTTCGAATCTGTTCTCAAAACTGCGGTTTCAACCAGCCCTTCTTCTCGTTTG
TTTGCCCGGCTCAAGGAGTATCATCAGGACCCTAAAGTGCATGGACATGTGATTATCGAG
ACGAGCTTTGGAGTCGACGTCGAGTCGGGCGTGCAGACAGGTAGACAGCTGCCCGATGAT
TACATACATATGGTGAGGGTGGCTAAATAGATAAACTGTACTTTTATTGGTTGCACTGGA
GATTGAACACATGACACGATAGTACTTACTGGTGGCTGCTCTGCAGATCGAACCCCGATA
TCGGAGTGGAAGGTGAAATTGGGCTATGTAGCGAAGGTGTGTGTGGGAGGAGAAGATACA
ATCGAATAAACAAATAATACAAAGAGTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13618g_CDS-001

Protein length: 930 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D13618g_CDS-001 MPPKRQYSHGERVGHIPNRQSNVEDYFNPNHPLTPPDTKRSRANERRPSVAGQGRVFDSG
FGNAFEDEKTGGVRFWDSDQLNLSPDSSPFPPVSQDRYGGGQDPRVEDVSEGDLDTDITL
PEDSGYVNQSLIANLKESKTTAERVWANEDDLGPFGEPYLVDPEEPTGPKIEKSDEAFNM
TVEMALADFEEKKRAFEQSQKILRDVLENSKSWGECPSPDRRYNSEVPNGTPKEKSSDKV
YVSVPIEEPPQSDSLDHVGDRFADAVCQGSVEEVGGSGEQNCPHQLTSGPASTSNCRPSL
KEQVESEEAMQGPWKVPAVETVELIKQLRRAKLDENIQQTAKASKAFASKVPASKVPASK
SPALKVVQAKQGRRANPVRAVRQNPQPRIVVITPDTGRDSDDILDYPSEDGTHTESGSGS
ESESVSGLEDEDDEIQVEIGDLSDESESNESTKRSRSVRKSFSKQYPLDGTDSELEENES
ESEGDQEEREDQEEREDEEANDTHSDKNKYGSDEYETYGVTSPCSETIPSDYPEVPHDAE
NEDTNANTSMSRHEVEVSFNEALFEIGSFPESSQSTMNSSKNTSLSKNTTCSKKTFTLEC
IEYVVEPFTTVHWWFVCPPNPPTADAPIIVQTLVDICTRKVGENSDRLPPQMIAESKRGW
DFWGNIWNAILEHHKDTFAIFVCFAAAFGHRAQFSCHLQGDSRPKHVITSHHRLQLIEAP
PAKKDISYLQSVLSPTKDEIPFRNHLILSYSGKRVAENVLSSLPTLKTLSVLDLRRLGVS
SGKLTPWINMLKRGEWPHMRAVLVGPAESEKMKEFLQFPEMWFVGYEPLEKAPKIKAGDM
WYQCTTRDILAKEKRWNFQKSGLFESVLKTAVSTSPSSRLFARLKEYHQDPKVHGHVIIE
TSFGVDVESGVQTGRQLPDDYIHMVRVAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG