YALI0D13442g

Overview

Description similar to uniprot|P47160 Saccharomyces cerevisiae YJR125c ENT3 cytoskeletal adaptor
Locus type CDS
Locus tag YALI0D13442g

Location

Species Yarrowia lipolytica Positions 1660515..1662077
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1563 (nuc.)
Previous locus YALI0D13420r Next locus YALI0D13464g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13442g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13442gYALI0D13442g_mRNA-001YALI0D13442g_CDS-001

Nucleotide sequence

 

>YALI0D13442g
ATGGACCAGATTCGAGACCAGCTGTCCAACGTGTCCCTGTACGACGTCAAGGCGTACGTG
CGCAAGGCCCAGAATGCCGTGATGAACTTCACGCCCATCGAAGCCAAGGTTCGAGAGGCC
ACCAACAACGAGCCATGGGGAGCCTCCAGCACAGCCATGCAGGAGATTGCGGATGCCACC
CACAACTACAACGAGTTCCACGACATCATGTCGATGATCTACCGACGGTTTACCGACAAG
ACGTCGGAGGAGTGGCGCCAGATCTACAAGGCTCTGCAGCTGTTGGACTACCTGGTCAAG
CATGGTTCGGAGCGGGTCATTGACTACGCCCGATCCCACGTAGGAGTGATCCAGATGCTC
AAGAACTTTCACTTCATCGACGCCAACGGCAAAGACCAGGGTATCAACGTGCGAAACCGG
GCTAAGGAGCTCAACGAGCTGCTCAAGGATGTTGCTCGAATCCGGGCCGAGCGAAAAAAG
GCCCGAGCACAAAAAAGCAAGACCAAGGGCTTCGGCGGCACCGGCAACAAGTACGGTGGC
TTTGGTAATGACGCCGCAAACTCCGTCCAGCTGGGCGGTGGCGGAATGGGAGGAAGATCG
CGGGCGGGCCGGTTTTCGACCTCAGGCTCGTCGTCCGGATTTGGAGCATACGGAGGAGGC
CGTGTCTTTGGCGACGGAGGAGGCTTCGATGGCTCCGAATACGACGGACCCGGGTACGGC
AACAGCGCCGAGGCCAGCGGATCGGGCGAGTTCAACGACAATGATTCGTTCGAGGAGTAC
GATGCCGGAGGAGACGCTGCCGAGTACGAGTCTGCCCCCCCTCCCGTGCCCTCCAAGACC
GCAAAGTCCGACGATCCCTTTGGATTCGACTCTGCTCCTGCTGCTGCTTCCGCTGCTACT
GGAGATGATGAGGACGAGTTTGACGACTTCCAGTCGGCCACTCCTGCCACCACTGCTGCC
ACCAGCGCTGCTGCTGCTGCTGCTCCTGCCACCAAGCCCGGACTCACCAACCTCGACGAT
CTGTTCAAGAACATCCCCACCAACACTGGTGCGAGCAACGGATCCAACAGCAACAACCTC
ATGGGTGGCAACATGAACAGCTCCTTCACTGCTGCTTCCACCACCTCGGGTCCCAACTAC
GCTGCCTTTTCCTCTTTCCAGAGCAGCTCTGGCGGCATGAGCTCTTCCACCCCTGCCCTG
GGCGGCTCGGGTCTCGGTGGCGCGTCCACCCCCGCATCGGCCTCTTCCACCGGCCTGGGA
GCCGCCTCCAAGCCTGCAGCTGCCAAGTCATCTGGCGGAGCAGACGCCTTCTCCAACCTG
TGGAGCACCGCTTCCACAGGCGTTACCAAGGCCAAGAAGAACGAGCCCACAACCTCGTTG
TCATCCATGGCCCAAAAGTCCAACGAGGAGGCTTTGTGGGGCGCTCCCGCTTCTTCGTCT
TCTTCCACTCCTGCTCCTGCTTCTAAGCCTGCGGAGACCGGCAACCTTTTGGATCTGTAA
ATGTGGCCCATGTAGACATGTTAGACCAGTAATGAATAATGATTTGATGAATACGGAAAT
GGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13442g_CDS-001

Protein length: 500 aa.
Product: Protein containing an N-terminal epsin-like domain, putative

>YALI0D13442g_CDS-001 MDQIRDQLSNVSLYDVKAYVRKAQNAVMNFTPIEAKVREATNNEPWGASSTAMQEIADAT
HNYNEFHDIMSMIYRRFTDKTSEEWRQIYKALQLLDYLVKHGSERVIDYARSHVGVIQML
KNFHFIDANGKDQGINVRNRAKELNELLKDVARIRAERKKARAQKSKTKGFGGTGNKYGG
FGNDAANSVQLGGGGMGGRSRAGRFSTSGSSSGFGAYGGGRVFGDGGGFDGSEYDGPGYG
NSAEASGSGEFNDNDSFEEYDAGGDAAEYESAPPPVPSKTAKSDDPFGFDSAPAAASAAT
GDDEDEFDDFQSATPATTAATSAAAAAAPATKPGLTNLDDLFKNIPTNTGASNGSNSNNL
MGGNMNSSFTAASTTSGPNYAAFSSFQSSSGGMSSSTPALGGSGLGGASTPASASSTGLG
AASKPAAAKSSGGADAFSNLWSTASTGVTKAKKNEPTTSLSSMAQKSNEEALWGAPASSS
SSTPAPASKPAETGNLLDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG