YALI0D13178g

Overview

Description similar to uniprot|Q12509 Saccharomyces cerevisiae YLR085c ARP6 Actin-related protein
Locus type CDS
Locus tag YALI0D13178g

Location

Species Yarrowia lipolytica Positions 1641319..1642710
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1392 (nuc.)
Previous locus YALI0D13156g Next locus YALI0D13200g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13178g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13178gYALI0D13178g_mRNA-001YALI0D13178g_CDS-001

Nucleotide sequence

 

>YALI0D13178g
ATGATCCTGGATAACGGCTCGTATGCGATCAAATCGGACCGCACGGGCGACGCGGAAACT
CCCAATGCTCTGATTCGCGGACGCGACAAGACTGTCTACGTGGGCCAAGATCTGACCAAG
TGCAAGGACTACGCTTCTCTGGTGTTCAAACGGCCGTCGGAAAAAGGCCAACTCATCAAC
TGGGACATTCAGAAGGCCGTGTGGGACAATCTCTTTTACAATCCGCAAACCGGAGTTGAT
ACAGACTCGTCGCTGCTGCTCACACAGTACCCGCTGACGCTGCCGCAGGTTTCGGCCAAC
ATTGACCAGGTGGTGTTTGAAGAGTATGGGTTTGAGCAGTACCATCGAACCGAGGCGGCG
AATCTGGTGGCGTGGTCGTCGGGCCAATGTTTGGACGCGTGTCTGGTAGTGGACGCCGGG
TTCAACGCCACCCATGTGACTCCAGTTTTGTTTGGACAGGTCCATGAACCTGGCATCAGA
AGAGTCAATGTGGGAGGCAAAACCATGACAAATCTGCTCAAGGAGACCGTTTCGTTCCGC
CACTACAACATGATGGATGAGACTTACATTATCAACCGGGTCAAGGAAAAGGTGTGTTTT
GTGTCGCAGGACTTTGACAAGGATCTGGATCTGGCCAAAAAAACTAAATCACTCCAGGTC
GAGTACGCGCTCCCCGACTACAAAACAACCAAGCTGGGGTACGTGGTTGACCGCAAACAG
CACGATATTAGCGAGCTTCAGACGCTCAAACTCGGTAATGAACGGTTTACAATGCCCGAA
ATTCTGTTTGATCCGTCTATTATTGATTTGCAACAGAGTGGGCTGTGTGAGACCATTGCA
GAGTCGATCCAGGCGTCGCCAAAGGAGTTCCGGTCACTACTATGCAGCAATATTGTCATT
GTGGGAGGATGTGCCAAGTTACCTGGTTTCCAGAGCCGACTCGAAAAGGACCTGAGACCT
CTTATTCCCTCAGAGTACCACATGAAGACGCGACTAGACGACAAACCCGACTTTACGACA
CTACAAGGAGGCAAAGTGTTGGTTGATCAGCCGGGATTTTCCAACCTCTGTGTCACCAAA
CAGGAGTACGATGAGTACGGATGGCGCTTGTGTCGTCAGAGGTTCCAGGGCGAGACTTTT
GATGAGGATACCGAAAGTGCGTGAGGAGTGTAGTGGTGGTCCCTGTGACTTTCTTATCGG
TCGAATTTGAGGCTGGCTCTGGATTTCGTCTTGCTGGCGGCTCTGTCGGTGGTGGGCGTT
TAGCTCTGGCTCTTGCCACTGTTGCGCTTCCGCTTCTGCTACTTGTGGGATGACGGTCAC
TGCATCTCCTTCTGGGAATCTCAAAACGAAAGATTCCTTATTTATCTGTAATATATGAAC
ATTTATTGACAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13178g_CDS-001

Protein length: 388 aa.
Product: Actin-related protein that binds nucleosomes, putative

>YALI0D13178g_CDS-001 MILDNGSYAIKSDRTGDAETPNALIRGRDKTVYVGQDLTKCKDYASLVFKRPSEKGQLIN
WDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAA
NLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFR
HYNMMDETYIINRVKEKVCFVSQDFDKDLDLAKKTKSLQVEYALPDYKTTKLGYVVDRKQ
HDISELQTLKLGNERFTMPEILFDPSIIDLQQSGLCETIAESIQASPKEFRSLLCSNIVI
VGGCAKLPGFQSRLEKDLRPLIPSEYHMKTRLDDKPDFTTLQGGKVLVDQPGFSNLCVTK
QEYDEYGWRLCRQRFQGETFDEDTESA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG