YALI0D13156g

Overview

Description weakly similar to uniprot|P38966 Saccharomyces cerevisiae YDR089w
Locus type CDS
Locus tag YALI0D13156g

Location

Species Yarrowia lipolytica Positions 1636710..1639457
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2748 (nuc.)
Previous locus YALI0D13145r Next locus YALI0D13178g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13156g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13156gYALI0D13156g_mRNA-001YALI0D13156g_CDS-001

Nucleotide sequence

 

>YALI0D13156g
ATGAAATACGGCTCTGAGCTGAGCCAGAGGTCGGTGCCGGAATGGAAGTCGCACAACCTC
GACTACGACGAAATCAAACAGCTGATCAAACGGGCCACTACCGACGACGCCAAAGACCCG
ACGACGGAAACGCACGTGCTGGAGGCGCTGAAGAACGAGTTTGAGCACATTTCGCTGTTT
GTGCGGTCCAAAACGGGCGAAATCGACCGCCGCATCATCCACTGCCAGAAGACCATCGAC
CACATTTCCGAAGACGACCGGGTCAAGGAGGAAACCTACGCGGCCCAGGGAAAGAGCTAT
GCCCACCACCTCAACTCCAAACGCCGACAGACCCGCCTGTACAAGCTGCGGACGGAAATC
AACCGCGTCACGGTCGAGGTGCAGAACCTGGCCCGATTCATTGGCGTCCAGAGAACCGGG
TTCCGCAAGCTGCTCAAAAAATACGCAAAGTGGAGTGGCAAACAGACGCTGCATCAGTCC
TTCCTGCCCACCCTCGACGGCATGTACTCCTTCACACAGCAGGACTTCACCCCCGTCTTC
CTCGAACTCTCCTTCATCTTCGAAACCCTCAGACAGGCAAAGTACCAGTCCATCAACACA
TACATCCAGACCGCCCTGGGAGACAGAGACGGAAGCGACCCCGCCCAGTTCGACACAGAA
ATGGTCACCCTTGCCACAAACATGCCCAACGCAGGAGCAGTCGCCATGTGGGTCCACCCA
GACCACATCACCGAGCTCAAGGTCATGCTACTCAAAACCATGAGCTTTGTGGACTCGCCT
AAAACACTGCGACAGAAGGGAGAGGTGCTGGCCACCTCTGTGGACACAAACCAGGGCCCC
AGCACCCCCACGCTGTCGCGACGCCCGTCTCTGACCCTCACCCGGGCACTGTCGGACCAG
CACGTGACCGAACACTCGCATGCCGTCTACCTGGACGACCCCCGCAAACTCATTTCCATC
CAGACAAACACAGAGCCCGGACAGATTCGCTGGGTCGACGTGCTCCCAAAGGACTCTCTA
AACAGTGAATCCGACTCCCCCCACCAAACGATGCATCTTTCGGAAGCCGGCCCCGAAACA
GACCCCGACTACGTCCTGTGCGCCCCCGTGGGCGGATTCCGGCACTTTGCGGCGTCACGC
GTCTCCCGTGACCTCGCCGACGCCATCTACCACTCCAATCTCGAGGACGCAAAGTGGGAA
ATTGACAATCTCAACGGTAGTGGTAAGCTGGCGGTCGAGTGGGTGGCCAAGCGAAATGCC
GTGCCCCTATCGCAGGCGTCTATGCACAGATCGCGGTTCCTGTTTGAAGACTCGCTCAGC
ATGTCCATTGGCGAACGACGCAAGTCTGTGTCAATCTTCGAGCAAGGTACCCCCTCGGGA
TCGACGCTGGATAACCCTAACGAGTCGTCCAAGGTGTGGGCGACGCTGGACGAGGGCATC
ACCGTCAAGCGGGCTGGATTCCATGCACACTTTTCCAAGGATGGCCCCAAGTCTGCATCT
TTCCCGTATGCCGTGCTGGAAATTAAATGGAAGGGTCTCAAGCCGCAGTGGATCGAGGAC
ATTGAAAAGTCGCATCTGGTCCACGTGGTCGAGGGCTTTTCCATCTACTCGCATTCTATC
GCCCTGTTCCATGCCCAGGCGCTGTCCAAGCCTCCCCACTGGATGAAGACTCTCAACAAG
GTGGATCTCCTCAAGTTGCCTCCCAAGAAGGTGAGAGAGGAGCCCACAACAGCATCCGGC
AACACCGCACAACTCCAGTTGTCACGGGATTCAAACACACACCCTGTGTCCGGCTCAATT
CTGCTCAATTCGAGCCCTGGATCGATCCCCTCACTGACTGATGAGCTGTCCGACACGTCG
CAGGAGACTACCGAGCCCCCCAAGGTGCGGTACTGGAACGAGTTTGACAACCCCGAGGAC
GGCGAGGACGATTCTGGCATTTTCATCTACACTAACGGCGACGAGCAGGGTCTGACACAC
GACTTCCTCACCGAGGGACACGTCAACAAGCTGATTCGCATTTCAGACAATCTCGCCGAC
AAGGTGCACAAGACGGCGTCCAAGGTGCGGAAGCTGATGGGCATCAAGCCCAAGCGTTCG
TCGCTGTCGGACGAAGAGTCTGCGTCCGACAATGAGGAGGAGTCTCTTTTGAGAGGCCGA
CTCTACTCCCCACGTCTTAACCCCAACTACAACGACTATGACTACGGGTCTGCAGCCAGT
TCGGTGTCGGAGCAGGTCACGGACATTTACGGCGAAGACGAGTTTGCGGGCTACGGCCAG
CAGCAGCAACTTGTGGCCGACCGACGTGACCGGGTTCTGTCGCTCTTCTATTCCACCTGT
TTCCTGCTGTCGACCCTGATTGTGGGTGTGCTGTGTGGTATCATTGCAGGAGAGGATATG
AACCAGGTGTCTGGAGGCGCCATTGCGTTTTCTTTCCTTGCCTTTATGTTTTCCACCGCA
CTGGGTATTGTGGGGCTGACGCTGTATCTTATGCGAACCTCGACGCCGTCGCTGTGGCAC
CAGTCGTTTGTGTTTGTCGTCATGATGCTCAACGTTTGCTTTGGCGTTGGAGGGTTTGCG
TGGTTGTTGGCGGAGATTGTGTAATTTATAGCATAGGCAGTACGCGGCTTTGAAAGCATC
GCTTGAGAGGCTGCGATTGCGGAGTATCCACCCGCCGGGTTGAGGATGTCGTTCGACACT
CCGCGGTGAGACATGGTGGGATATTTAAGTAATCATTGGTATAACAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13156g_CDS-001

Protein length: 868 aa.
Product: Conserved hypothetical protein

>YALI0D13156g_CDS-001 MKYGSELSQRSVPEWKSHNLDYDEIKQLIKRATTDDAKDPTTETHVLEALKNEFEHISLF
VRSKTGEIDRRIIHCQKTIDHISEDDRVKEETYAAQGKSYAHHLNSKRRQTRLYKLRTEI
NRVTVEVQNLARFIGVQRTGFRKLLKKYAKWSGKQTLHQSFLPTLDGMYSFTQQDFTPVF
LELSFIFETLRQAKYQSINTYIQTALGDRDGSDPAQFDTEMVTLATNMPNAGAVAMWVHP
DHITELKVMLLKTMSFVDSPKTLRQKGEVLATSVDTNQGPSTPTLSRRPSLTLTRALSDQ
HVTEHSHAVYLDDPRKLISIQTNTEPGQIRWVDVLPKDSLNSESDSPHQTMHLSEAGPET
DPDYVLCAPVGGFRHFAASRVSRDLADAIYHSNLEDAKWEIDNLNGSGKLAVEWVAKRNA
VPLSQASMHRSRFLFEDSLSMSIGERRKSVSIFEQGTPSGSTLDNPNESSKVWATLDEGI
TVKRAGFHAHFSKDGPKSASFPYAVLEIKWKGLKPQWIEDIEKSHLVHVVEGFSIYSHSI
ALFHAQALSKPPHWMKTLNKVDLLKLPPKKVREEPTTASGNTAQLQLSRDSNTHPVSGSI
LLNSSPGSIPSLTDELSDTSQETTEPPKVRYWNEFDNPEDGEDDSGIFIYTNGDEQGLTH
DFLTEGHVNKLIRISDNLADKVHKTASKVRKLMGIKPKRSSLSDEESASDNEEESLLRGR
LYSPRLNPNYNDYDYGSAASSVSEQVTDIYGEDEFAGYGQQQQLVADRRDRVLSLFYSTC
FLLSTLIVGVLCGIIAGEDMNQVSGGAIAFSFLAFMFSTALGIVGLTLYLMRTSTPSLWH
QSFVFVVMMLNVCFGVGGFAWLLAEIV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG