YALI0D12430g

Overview

Description weakly similar to uniprot|C5JMW3 Ajellomyces dermatitidis R3H domain-containing protein
Locus type CDS
Locus tag YALI0D12430g

Location

Species Yarrowia lipolytica Positions 1548122..1550301
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2180 (nuc.)
Previous locus YALI0D12408g Next locus YALI0D12452g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12430g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12430gYALI0D12430g_mRNA-001YALI0D12430g_CDS-001

Nucleotide sequence

 

>YALI0D12430g
ATGCCCCTCGACGACGCGCTCAAACGGGCTCTCGCCACGCCGCAATCGCGTCTGTTGGTA
CTTAAAATCGAGAAGCAGCTGCAACAATTCCTCGATGCACAGAAAAATGCCTCGCTGCTG
CCCCCCACGGCGCCCGTGGCCCAACAACAGCAACACAAGCCGCCGTCCCTGACCCTCGAC
TCGATGAACTCGTTCAACCGGCTGCTCACTCACCGCATCGCCGAGTACTACGGCCTGGAC
CACGTCGTCGTTGACGGACACGCTGTCAAAATCTTCTATCGCGAAAAACGACCCCAGGTC
ATGGCGTTGGCTGACATTGATGTGTCTGGCGTCGACCCTGAGGGACCTCGAGTCGGAAGA
GGCGGCAATGGAGGCGGATACCACACCAACGTCAACAATTCAGGCGGCAATCCCGGTAAC
AGCGGTGCTGGAGGACCCCCTGGCTCGGCTGGATCGCTGGGAGGCAATGCTTCTGCGTCG
TCGTCCGTGTCGTCGCTGACAAACAACATGTCGGCCTTGACGCTGGAGCCCGACCAGGCG
TTGAAATCCGCTCTTGTGACCATCTCTGCGCGAAACCACGTGCTCAAGATAGAGCAGAGT
ATCCTTAGTCTGGTTGCAACCTCCACAGAGGAAGGTACGCCTGCTGACCCCAAAAACGAA
GGCACACCCGAAGTCACTAATAATGCAGAGGATGAACCGTCATCGTTTCAGTCCCCATCT
CCATTGCCAAACCTGCCATCCCACGTGACGGTTGAGGGACCCACACCGTACCACCGGCTG
CTCATCTACAAGCTGGTGCAGTACTACAACTTCACCTACGACGTGGACGAGAAGACGCAC
AAAATCACAATCTACCGCCCTACAGTAACGCCGCAGCTGCCCCGGCCCATGGAAGCTTTC
CTACAGCAGCCACGCGAGGGGGACTGGCCCCCCATCACACTGCGAGATGGTGCTGTCGTG
TGTGGCCTGTTGCGTAAGTCTCTGATGGAGCCCAAGTCAAGAATGTTGATTGTGAGGGTT
GAAAATGATATTCTCGCGTATTTGACTGCGGTTGTAAACACTAATGTGCCCTCCGCCAAC
AGTGATGGAGCTACCCCCAACGACAATACTGTTGCTGATGCCGCTGATGGCGCTTCTAAC
GATGATACTACCGAAACCAAACCAGCCATTCCCACGGGACCAGCTTCTGGACCTGACAGC
GCTGCTTCTGCGCCACCGCTCATTCTCGCGGGACTCAACTCGTTCAACCGGCTGTTGGCA
CACAACGTTGCTGTTTATTACGGTCTGGCACACACCACCACATCCCAGGAGGTAATTGTG
ATTGAAATCGAGCCTGGCAGGGAGCCGCGACGCGCCATCCCCCTTGGTTCGATCCCGATG
GAGGAACTGGCGTGGGCTGGAGCTGCCGCTGCCGCTGCCGCTGCCGCTGCTGCATCCAGT
GCACCCTCCAACGGTCCTCCTCTGCGGCTTATGCGTCGAAACTCGCCGCGAAACAACTCG
CCTGCAGCTGAGGAGTGGGCCAATGGTTCGGGTTCCAGTCCCGGAGCTTCAGGGTCGCCA
GGCCCCGAGGCCAGCACGTCCACGTCGCTTGAGGAGCGAGAACAGGCATACCAAAAGGCC
CGGGAACGCATTTTCAAGGACGTGGACGACGAGTATGCATCCGACGAGACGTACGAGAGC
CGTGGTAACAACAATATGAACCGACGGGGTGGAGGAAGAGGAGGTAGAGGAGGACGAGGG
GGCCGAGGAGGCTACGGAGGCTACAACAGGTATGCAGGAGGACACATGAATGGAGCAGCA
GTAGCGGCAGGGGGAGCCAACAATCCCAACAATGGCGGAATGATGCCATGGATGATGTAC
CCACCGCCTCATGGAATGCCTCCCATGATTCCACATATGGGCCACATGCCTCCTATGATG
ACGCAACATATGCCCCACCAAGCTCACATGGGCCACCATGCACACGCACACGCACAGCAC
ATGCACGGTCAACACATGCCGCCCATGATGCCCCCGCCACCGGAGTACTACGGCTACCCT
GTCTACGGCTACCACTCGCCAATGGGGTACAGCCCCATGCATTCGCCTGGCCCCGACGGC
TCCTCTGAACGCGAAGAGGAGCCCGAACCTGTACAAAATGGAGACGCGAAATAGACAATA
GACTAACGACTTAATGATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12430g_CDS-001

Protein length: 718 aa.
Product: Conserved hypothetical protein

>YALI0D12430g_CDS-001 MPLDDALKRALATPQSRLLVLKIEKQLQQFLDAQKNASLLPPTAPVAQQQQHKPPSLTLD
SMNSFNRLLTHRIAEYYGLDHVVVDGHAVKIFYREKRPQVMALADIDVSGVDPEGPRVGR
GGNGGGYHTNVNNSGGNPGNSGAGGPPGSAGSLGGNASASSSVSSLTNNMSALTLEPDQA
LKSALVTISARNHVLKIEQSILSLVATSTEEGTPADPKNEGTPEVTNNAEDEPSSFQSPS
PLPNLPSHVTVEGPTPYHRLLIYKLVQYYNFTYDVDEKTHKITIYRPTVTPQLPRPMEAF
LQQPREGDWPPITLRDGAVVCGLLRKSLMEPKSRMLIVRVENDILAYLTAVVNTNVPSAN
SDGATPNDNTVADAADGASNDDTTETKPAIPTGPASGPDSAASAPPLILAGLNSFNRLLA
HNVAVYYGLAHTTTSQEVIVIEIEPGREPRRAIPLGSIPMEELAWAGAAAAAAAAAAASS
APSNGPPLRLMRRNSPRNNSPAAEEWANGSGSSPGASGSPGPEASTSTSLEEREQAYQKA
RERIFKDVDDEYASDETYESRGNNNMNRRGGGRGGRGGRGGRGGYGGYNRYAGGHMNGAA
VAAGGANNPNNGGMMPWMMYPPPHGMPPMIPHMGHMPPMMTQHMPHQAHMGHHAHAHAQH
MHGQHMPPMMPPPPEYYGYPVYGYHSPMGYSPMHSPGPDGSSEREEEPEPVQNGDAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG