YALI0D12364g

Overview

Description some similarities with uniprot|Q9QXE2 Mus musculus DNA polymerase lambda
Locus type CDS
Locus tag YALI0D12364g

Location

Species Yarrowia lipolytica Positions 1536379..1538630
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2252 (nuc.)
Previous locus YALI0D12342g Next locus YALI0D12386g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12364g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12364gYALI0D12364g_mRNA-001YALI0D12364g_CDS-001

Nucleotide sequence

 

>YALI0D12364g
ATGGGACCTAGAGCGACCAGAAACAGCTCCAAGAACACAGAAGGCGCTGAGACAGCGTCC
AAGGACGCCCAATCGCAACACAATGCCGCCAGCGACACGAAACAAGCCTCGAAAGAGGTT
TCTTCAACTGCCACCAGTCCCAAAGTTGCTCTAAAACGCCAACATCGAACTGCCGCCTCA
ACAAACTCAGACGAGAGTTCAAGTAAACCGTCCACGCCGACCGGAAGTGTGACTTCGACC
GTGGAGTCGCCCCGAAAGGCCAAGAAGACAGATGCGGTTGTTGAGGGAGAGCAGCCAGAG
ACTACCGTCAAACAGGAGCCTGACTTTGAAAGTACTGTCAAAATTGAGCCCATTGAGGTT
GTCAAGACTGAGGATCCGGGGCATGACATAAAGGTGGAGGATAGAGATATTAAGACTGAA
GAGGACACCAAAGCTGGGGGAAACGCCAGCAGAGAAGAAATCAAGAATGAATATCACTCG
ACACCAAACCTTCCGCTATTTCACGCGATTACAGTCATGTTCATTCCTCTTTCGAAAACC
AACAAACACAGAGCAGAACTGTGTAGTCGTCATGGTGGCACTGTGGTCACCTCCTACTCG
GATAAAGTGACTCATATTATTGTGGCCAACGGGGTAACAGTTCCCCAGCTGATGAAGACT
CTGGGAGTGGACACTCTGCCCGCTTCCGTCACCGTGGTCAACGAAAACTGGTTTGCTGAC
TGCATTGAAGCCGGCAAGATTGTCGGCTTTGGTGGTAAGGAAGTGCTTGGGGTCCCCCGA
GGTGGAGATAAGCGAACTGCTGAAACCACGTCCGATGACACAGACGCAAAAAAGCGTCGA
CGAGCTAGTGATGCTCCCTCAAGAAGCACAACTCCTCCAGCCTCGCCCAAATCCAGGTCT
GAATTGCGTTCAGATGTGTCTTCTGACGTGATCAAGGCACGTGGAAAGTCCATGCTTGAA
GCGCTTCACGATGTGCGTATGCAGGATCACGCCCATGCTTTTGCCTCAGAGTGGGAAGAT
GATGGAGATGACGATGCTGACACAGACGACGACGATGCTGACGAGCCCCACAAACACAAA
AAGAGCCAGCCGCAGAAACAGGGCGATTGGGTCGACAACTTCCTGTGCATGTCTGGACCC
GAACGGGATCCCGTGGACAAGAACCCCAACTGGAAGACCATTGAGGTGTTGAGTCGTCTT
TTGAAATACTATGAAGACAAGCATGATCAATGGAGAGCCCAGAGTTACAGGAAGGCGTTG
AATGTTCTGAAACGTCAGCCAAAGAAAATCACAACCAAAAAGGAGGCTGTCAAGCTGCCT
GGTATCGGTGATTCTATCGGTTCAAAGATCCAGGAGATTGTGGAAACAAACGGTCTGAAA
CTTCTCAATGTGACCAAACTGGATACCTCAGTCAAGGTTACTTCTCTGTTTGAGGGTATC
TGGGGCGTCGGTAAGGCCACAGCAAGAAAATGGTATAAAGAAGGATATCGAACTTTGGAC
GATATTGCGAAGAAGGCCACCTTGACTCCCAACCAAAAGGTGGGTCTTGAGCACTATGAC
GACTTTCAGGAACGAATTCCTCGAGATGAAGTCACTCGACACTTTATGGTTGTCCAAAAG
GCGGCTCATGAGATTGATCCAGAGGTCGACGCGCATATCATGGGCTCGTACAGACGTGGA
GCGGCTTCTTCAGGAGATATCGATATGATCTTCACCAAGAAGGGGGCCACTCTCGATGAG
CTCCAACCGTTTCTGAAGGAGCTGGTTCATAAACTCACAGAACAGGGTTTCCTCAAATGT
GGACTTACCGGCGCCTCTACAAAGTGGTACGGGTGTTCCAAACTCAAGGATATCCCCCAG
TGGCGTCGAATCGACTTTCTGCTTGTTCCATGGGCCGAGAAGGGCGCTGCCTTCATTTAC
TTTACTGGTAACGTACTTTTTAACCGAAGTATCCGGCTGCTTGCCAACAAGAAGGGCTAT
AGTCTCAACCAGCATGGTCTGTATGCAGGCGTACTGCGAGGAGAACGGGGGTCGAAATTG
AATGACGGATACTTGGTGGAGGGTGAGAGTGAACACAAGATCTTTGAGATTTTGGGTGTG
CCTTACTGGGAGCCGTGGGAGAGAAATGTTTAACGAGCGAGCCGTTTCTAATCCGAGTCA
ATCCCCAGTGAGAGATGACAGGGAAGCTCTACTTGTAGCAGAACACCCCGCTTATTTATG
TCTTTAATACCATATCTGAACTATTGTAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12364g_CDS-001

Protein length: 711 aa.
Product: Conserved hypothetical protein

>YALI0D12364g_CDS-001 MGPRATRNSSKNTEGAETASKDAQSQHNAASDTKQASKEVSSTATSPKVALKRQHRTAAS
TNSDESSSKPSTPTGSVTSTVESPRKAKKTDAVVEGEQPETTVKQEPDFESTVKIEPIEV
VKTEDPGHDIKVEDRDIKTEEDTKAGGNASREEIKNEYHSTPNLPLFHAITVMFIPLSKT
NKHRAELCSRHGGTVVTSYSDKVTHIIVANGVTVPQLMKTLGVDTLPASVTVVNENWFAD
CIEAGKIVGFGGKEVLGVPRGGDKRTAETTSDDTDAKKRRRASDAPSRSTTPPASPKSRS
ELRSDVSSDVIKARGKSMLEALHDVRMQDHAHAFASEWEDDGDDDADTDDDDADEPHKHK
KSQPQKQGDWVDNFLCMSGPERDPVDKNPNWKTIEVLSRLLKYYEDKHDQWRAQSYRKAL
NVLKRQPKKITTKKEAVKLPGIGDSIGSKIQEIVETNGLKLLNVTKLDTSVKVTSLFEGI
WGVGKATARKWYKEGYRTLDDIAKKATLTPNQKVGLEHYDDFQERIPRDEVTRHFMVVQK
AAHEIDPEVDAHIMGSYRRGAASSGDIDMIFTKKGATLDELQPFLKELVHKLTEQGFLKC
GLTGASTKWYGCSKLKDIPQWRRIDFLLVPWAEKGAAFIYFTGNVLFNRSIRLLANKKGY
SLNQHGLYAGVLRGERGSKLNDGYLVEGESEHKIFEILGVPYWEPWERNV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG