YALI0D12342g

Overview

Description weakly similar to uniprot|A5DAD4 Meyerozyma guilliermondii hypothetical protein PGUG_00239
Locus type CDS
Locus tag YALI0D12342g

Location

Species Yarrowia lipolytica Positions 1534139..1535868
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1730 (nuc.)
Previous locus YALI0D12320g Next locus YALI0D12364g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12342g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12342gYALI0D12342g_mRNA-001YALI0D12342g_CDS-001

Nucleotide sequence

 

>YALI0D12342g
ATGAAGGAGCATCTTGAAGGCGCTCTGGAAACAATCAGACAACCAGGAGAGGATGAAAAC
TTGCATGCCGACCTGAAACGGCTCTGCGCGGAGTCGGCGCGTCAGGAAATCAGCCACGAC
GAAATTTGCAGCCCAGACACCTGGCACAATATCAACCAGTGCCTTGCAGAGGCTACCATG
CTCCACAGAGATGGAAAGTTCTACCACAGCCGCAATGCCCGAGCAGTGATTCTTTTGAGT
CGAAACATTCTCGCCAGTGGTATTTCTCAGGCCCAGATCACGGCTTTTGAGTCTGGATGG
GCAACACACGTTCTACGGCTGGTCCAGAGCTACGGAGACGAACCCAAGGGCGCCAATGTC
ATCCCTCTGGCATACCAGGCGCTTTGTAACCTGTGTAGCGGCAACCAGGGAGTTTCAGCC
GAGATGTTCAAGACATATTTCGTTCCCCAGAAGGGAGACAAGAAGGAAGACGACACAGTT
ACAATTGTGTGGGACAAGGTATTACTGGACACGGCTCTGTATGCATTTGTGGTAACACTG
TGCGAATGCATTAACGATGATGTGGAGCTCCTGAAACAGTTTGATAACGCCGAAGCTCCT
GCATCTGAGCTTTTGGACGTTCTCATTGCACCCGTCACTTTCGACAGTGCGATCCATGCC
CGCCCCGAGTACCAAGCTCTGGTGGACGTGTTCAGATACTTGGCTGCGAACCGAGTGACC
GGACGGCTATCTCCTAGCTACCAATACCCCGTTATTGTTGCTATTGTTAAAGATGCCATC
ACTGTTGACCTGGAGGTAGTCATCGAGACAGAAGCCAAGTCCACTCCTTTGGATCTCGAA
CACTTGTTCATTGCATACTTTTCCATCTCCATGAAAGAACTCAAGCTGGTTTTAGATACG
GAAAGTAAGAGCTGCAACGCCGCACAAGTGATTCGGTTCTGTTTCGAGGCTCTCACTGTT
CTCCTGGCCACTGAGCCCAAGCTTCCCACCTGCTCGGGACAGCTTCAACATGACTACCCC
GAGTTCATCACTCAGGTCACCAACTACCTTGTTTTTGCACAGAAGGAGTACCCTGCCAAA
CGAAAGCTCAAGGAGATTCAGACTTCTGTTCTGGAGGTCACGGACTACCCTCATGTCAAG
AGTGCCACTATTGAGCTTCTGTCTTCCATTCTTCAAATTGCATCTGCTACTTCGAAACAG
CAGCTGGCAATGGTGCAGAGTCTCATCTGGAAGGCAGGAGGTCTCCCTGAAATTCTCAAC
TGCTGCAACATTGACGCCAACAATCCGTTTTTGAAAGAACGAGGAGTGGTTTGTCTACGA
TATGTCATGGAGGGCAACGAGGAGGCCCAGAAGTTTGTAGCAGATCTGGAGGCCCAATCA
CAGGCCCAGAAGCTCGACCCTAAAAACGAGGAGTCGTTGCCGTAAGCGACGAGGGATAGT
GACATAGAAACAGGAGCATACCAATAGCATTGCGCACTGTCTAACTACACCACGTACTTC
TTGTATGTGATTATGAGTGTAGGAACGGTAAATAGGGCACTGTATGTTAGCTACCGGCAT
GTTCGTGACCTGGCAATAACAAGATATGACTGCCTAAACCCAGGTTCTTCTTTTGATCAG
AGATGTAACCGTTGCGCAACATATACAATGCACTCACTCGTAAGATAGGGTCAAAAGTCA
GCTACTTGTACGTTACCCACATAATTTTTCAAAACAACTTCATTTTCATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12342g_CDS-001

Protein length: 475 aa.
Product: Conserved hypothetical protein

>YALI0D12342g_CDS-001 MKEHLEGALETIRQPGEDENLHADLKRLCAESARQEISHDEICSPDTWHNINQCLAEATM
LHRDGKFYHSRNARAVILLSRNILASGISQAQITAFESGWATHVLRLVQSYGDEPKGANV
IPLAYQALCNLCSGNQGVSAEMFKTYFVPQKGDKKEDDTVTIVWDKVLLDTALYAFVVTL
CECINDDVELLKQFDNAEAPASELLDVLIAPVTFDSAIHARPEYQALVDVFRYLAANRVT
GRLSPSYQYPVIVAIVKDAITVDLEVVIETEAKSTPLDLEHLFIAYFSISMKELKLVLDT
ESKSCNAAQVIRFCFEALTVLLATEPKLPTCSGQLQHDYPEFITQVTNYLVFAQKEYPAK
RKLKEIQTSVLEVTDYPHVKSATIELLSSILQIASATSKQQLAMVQSLIWKAGGLPEILN
CCNIDANNPFLKERGVVCLRYVMEGNEEAQKFVADLEAQSQAQKLDPKNEESLP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG