YALI0D12188g - EST2

Overview

Description uniprot|Q6C9D0 Yarrowia lipolytica YALI0D12188g EST2 Telomerase reverse transcriptase
Locus type CDS
Gene name EST2
Locus tag YALI0D12188g

Location

Species Yarrowia lipolytica Positions 1514945..1517817
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2873 (nuc.)
Previous locus YALI0D12166g Next locus YALI0D12210g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12188g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12188gYALI0D12188g_mRNA-001YALI0D12188g_CDS-001

Nucleotide sequence

 

>YALI0D12188g
ATGATTTTGATACAAGAAAGGTATCCATCGTTTGTATTTCCCGAGATAGAAATCTCCAGA
ACTGACACTTTCATCTTCTACAATGCTTCAGGCCACTGTCTTCCATCGATAAAGTTTGTA
TGGAGGTGTGTCTACAGTGCTAGATCAGTATGTACCTGTCCTCATTCTCCTTACCCAATG
CTCAAACGGCTGCAGAGCAAACTGCCCCAGAGTGATACCCTTCACGGTCATCTGTGTAAT
TTGCATTTGCACAGTTTCATCGAACCGTTCATTTTCCATGAGGTAATCTCGCTGTATGAA
CAAGATGACAGCTTCAAACACTTCCTGACAGCCACCATTGTCTCCAGAGGCCGGTTGGCT
GTTGTGAACCAGCTCATCATGCCGGACTATGTGAACGACTTGACATATCCGGCGTTTATT
CGGCTGCTTTCGTCAGTATCCAGCCGAGAAAGTGTGCTGCACACCCACGTCCAAGGAGTC
TTTGATCCCTCTGACAAACGGCCCATTGACGACCGAAACTCCATTCACACGGCCATTGAC
GCGTTGTGTGAAACAGGGTGGCGCAAATTGGAGTCTGTTCTAGGCCGCTATGAGTTTGCC
AAGTTGATTCTAGGCAACATGGTGTTCATGGAGCTCAGGAAGGACTGCTACTTTCAGGTG
TCTGGACCTCGAATTGACGATATTCTCTTGTGTCGCCCCACACACAAAGTGCAGACCGAA
TTGTTGTTGTTAAAGGCTCCACCGGGGAAAGTAGGCAAGAGAGTGCCGAGAAAGGGAATC
CTGAGATGCAAACAGGGAATGTATTACAGTCTAGGAAAGACAGGATACAATTTGAGTGTG
CGTGATCTGGTCGATTCCAAAGACCATAAAGTTGAGATAGAACATGTGCTGGAGTCAATT
TTTCCTTACACTTATGACAAGACTCAATCGAAACGTATTCCTAAACGTCTAGTTCCATTT
GTCCAAATTGCTTCTACTATCGTGAAAAAGTGTCAGCAATACAATTTTTTGCGGCTTTTG
GATGCCTGGTTCCCACTTAATCGCGACTACGAGGATGGGCACTCCGTTAACGATGTGGTC
TCCTTCTGTTTTGCAGCTTCTCATCTCCTCTTTCCTCACGTTTTATTTGGATCGGCAGAC
AATTGGGCCGTTCTACGTTCAAAGTACGTCTATTATCTGAACTTGCCATCTCGAACTTCT
CCGCATCTGGATACAATGACTGGGGGATTCAGGTTGACCGAAATCAACTGGCTCTTCACT
TCTGATATGAATCTGAAAAAGTCACGAGACGATATGCTCAAGGCACGTGAGCTGTTTGAA
CAGCTGATGATCTGGGTTACAAACCGCTTCCTGCCTCAGATTCTAAGATCTTTCTTCTAT
TTCACAGACTCTCTCACCAGTGACCAGATCATCTACCGACACCCTGTATGGCAAAGAAAG
ACCAGAAGCACTCTCCAAGAACTGAAGAGGACCCAGTTTTCAAGTAAAGTCCTTACTCCG
TCGGATCTCGGAATCTCAAAGTTCAGATTGATGCCAAAAAAGTCAGGCTTCAGACCCATT
GTGTCTTTGGGAAGACCTGTTCAGAGTCCCAGGGGAAAGAAACCGATCTCTGTCAACAAG
AAGCTCTCAAAGCTGTACAAGATACTGTATCAGGAGTTCAGACTCGGTGGAAATAACAAG
TGTGGTCTTGACTCGGTTCACCTGCTCAAAAAAGTGCTAGGGAAGTACGAAAAGGCAATC
AAGGGCCAAATTCAAGGTCTCAAGTTTGTCAAGATTGATGTCACTGCGGCCTTTGACACT
ATTCCAGCATCCAAAGTGAAAGACATTTCAAAACGACTGCTTGATTGTGAAAGTTACTCG
CTTCATAGCCACTCTCGAATCTTGCCTATGAGTTCAAAAACAGTTCTGAGATGGTTCACC
ACGTCTCGGGCCTGTAACGGGAGATCTGAGGGAGCTCTACAAGCCTTCAGACGTCTGGGG
AATAAGGGGATCATAGTGGATGAAAACAAAAGTGACAGTGTTGGAAAACAACTGCTGTAC
AAACTGCTCAACGATCACTTGTTCAGAAATGATGTTTTTATTGACGGTCAGGTACATAGA
CAAGTGCGTGGAATCCCGCAAGGCTCTATATTATCCTCTTTGTTTTGTTCCATGGTCTAT
GAGGAAATGGTGCGTGAAAAGTTCAGCGATCTCGTTGATAGACCAGATACCTGTCTTATG
CGATTCGTGGACGACTTTATGCTAATCACTACCGACACTGCTATAGCTACCGAGTTTTTA
AACAGAGCTCTCAAGGGCTTACCTGACTATGGAGTCTCTGTCAACCGATCCAAGTGTCTA
GTCAACTTTCCTCTGTCTGTGGGTGGTGTCAGAATCGCGCAGCTTGAAGAGGGCGAAATG
ATGCCGTTTTTGGGCATGAAGATCGATCCTTGCAATCTTCAGATACATCGAGACTATCCC
TATAGCTCTGCATTATTATGGGTCGATAAAGGAGTCAAGCTGGCAGCTGTCAGACACAGA
GCAAAGGAATACTTTTCGGCTCGGTTCCCCAGGCTGCTGTTGAACAAGAGTGTTCCTGAA
GCTGTGGTTCTCAAAAATGTGTCGGCATTCTTTCGGTACGTGTTTTTGCGAGCTATTCGA
ACTTTTGAACACTTTGGCCACGTCTCTGAGAGCAGGATCACTCAGGAAGCCATTACTTTG
GCTGCTGAAATGATCGATATTTCCATGTGTGTGGTTACTCCAAAGTGTCCCCATGTTGGG
TTGAAGAAGTTGCGTGGGTGGCTAACCAAGATTTCGGTTCTGTCCATTGAGAGGAGGAGA
TGATGAGTATGTGTGCATTTGTCTAATTTATTTAATTTCCCCCCTTGGTTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12188g_CDS-001

Protein length: 941 aa.
Product: Telomerase reverse transcriptase
Gene: EST2

>YALI0D12188g_CDS-001 MILIQERYPSFVFPEIEISRTDTFIFYNASGHCLPSIKFVWRCVYSARSVCTCPHSPYPM
LKRLQSKLPQSDTLHGHLCNLHLHSFIEPFIFHEVISLYEQDDSFKHFLTATIVSRGRLA
VVNQLIMPDYVNDLTYPAFIRLLSSVSSRESVLHTHVQGVFDPSDKRPIDDRNSIHTAID
ALCETGWRKLESVLGRYEFAKLILGNMVFMELRKDCYFQVSGPRIDDILLCRPTHKVQTE
LLLLKAPPGKVGKRVPRKGILRCKQGMYYSLGKTGYNLSVRDLVDSKDHKVEIEHVLESI
FPYTYDKTQSKRIPKRLVPFVQIASTIVKKCQQYNFLRLLDAWFPLNRDYEDGHSVNDVV
SFCFAASHLLFPHVLFGSADNWAVLRSKYVYYLNLPSRTSPHLDTMTGGFRLTEINWLFT
SDMNLKKSRDDMLKARELFEQLMIWVTNRFLPQILRSFFYFTDSLTSDQIIYRHPVWQRK
TRSTLQELKRTQFSSKVLTPSDLGISKFRLMPKKSGFRPIVSLGRPVQSPRGKKPISVNK
KLSKLYKILYQEFRLGGNNKCGLDSVHLLKKVLGKYEKAIKGQIQGLKFVKIDVTAAFDT
IPASKVKDISKRLLDCESYSLHSHSRILPMSSKTVLRWFTTSRACNGRSEGALQAFRRLG
NKGIIVDENKSDSVGKQLLYKLLNDHLFRNDVFIDGQVHRQVRGIPQGSILSSLFCSMVY
EEMVREKFSDLVDRPDTCLMRFVDDFMLITTDTAIATEFLNRALKGLPDYGVSVNRSKCL
VNFPLSVGGVRIAQLEEGEMMPFLGMKIDPCNLQIHRDYPYSSALLWVDKGVKLAAVRHR
AKEYFSARFPRLLLNKSVPEAVVLKNVSAFFRYVFLRAIRTFEHFGHVSESRITQEAITL
AAEMIDISMCVVTPKCPHVGLKKLRGWLTKISVLSIERRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG