YALI0D12100g

Overview

Description similar to uniprot|P53322 Saccharomyces cerevisiae YGR260W TNA1 High affinity nicotinic acid plasma membrane permease, responsible for uptake of low levels of nicotinic acid
Locus type CDS
Locus tag YALI0D12100g

Location

Species Yarrowia lipolytica Positions 1502660..1504168
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1509 (nuc.)
Previous locus YALI0D12078g Next locus YALI0D12122g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12100g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12100gYALI0D12100g_mRNA-001YALI0D12100g_CDS-001

Nucleotide sequence

 

>YALI0D12100g
ATGTCGACTCACTCGGTTCGCGACTCGGTCACTCATTCTCTCAAAGAGGATGCTGAGATT
CACATTCAAAGTGTCCATCCCACCATCAATGAGAAGAAGGTGACTCGCAAGATTGACCTT
AGAATTGTCCCCATTTTGTCGATTCTTTACCTCATGTCCTTTTTGGATCGAGGTAATATT
GGAAACGCAAACATTGAGGGTCTGTCTACTGATCTAGGGCTCACAGGTCCCCAGTACAAC
ATGTGCTTGACTGTCTTCTTTTTCACCTACTCCGTCTTCGAAGTACCGTCCAACATGATG
CTCAAGAGACTTAAGCCTTCCATCTGGCTGCCTGCCATTATGGTTGCTTGGGGTATCGTT
ATGACGCTGATGGGCATTGTTCAAAACTATGGAGGTATGTTGGCTACCAGAATCTTTCTG
GGACTCACTGAAGCGGGTCTATTCCCCGGTGTCACCTACTATCTCACTCTCTGGTATCCT
CGACGAGACATCCAGTTCCGAACAGCCATGTTCTTCTCTGCAGCCTCGGTAGCGGGAGCC
TTCTCCGGTCTCTTGGCCTTTGGTATTGGAAAGATGGACGGCGTTGGGAATCTAGAGGGA
TGGAGATGGATTTTCATTCTCGAAGGTATTGCTACCACTCTCATTGCAGCTCTTTCTTTC
TTCCTTGTGGTAGACTTCCCAGATACGGCCAAGTTCCTGACTGATGAGGAACGAGAATGG
GTTCTTTGGAGACTCAAGTACGACACCAACAGCAGAAAGACCAATTCTGCCAGTCAACAA
GCCATCATGGTTGAAGAAAATGACTCTCACTCCTGGGACGAGGTTAAGAAGGCAATCATG
GACCCTCAATTGTACCCCCAGTGTCTGCTGTACTCCGCTGTTCTCGTTCCCCTGTACGGA
GTGTCGCTGTTCCTTCCTACCATTGTCAAGAACCTCGGGTATTCCTCTGAAGGTGCCCAA
TTGATGACTATCCCCATCTACGCTGTTGGAGCCATTGCCTCAATTGTTCAGGCTTGGGTG
TCTGATCGATACGGTTGGCGATCTCCGCTGCTGGTCTTCAACTTTTGTTGCATGTTCATC
GGGTATATGCTGGCCATGAACGTGTCTGCAGTCCGCAACCCGTCAGCCACATATGCTGGC
TGCTATCTAGTGGCCCTTGGTCTCTATCCTGGTATTCCTGCTGTCATTTCGTGGCTTTCT
AACAACACAGCAGGCACTTACAAGCGAGGCGTGTCCATGGGCATGCAGATTGGATTCGGA
AATCTATGTGGAGCCATTGCCTCGCAGATCTACCGATCCAAGGACGCTCCGCAGTTCAAG
CTTGGACACGGCATTGAGGTCATGTTCATCTGTATTGGCTTCATCTGCATCTTTGTGCTG
AACCTCTACTACTACTTGGTCAACCGGAACCGCAGGAGGATGGTGGCTGAGGGCAAGGCA
GACGATCTCACCGTCACCCAGCTGTCAGAAATGGGCGACAAGTCTCCTCACTTTATTTAT
TCTCATTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12100g_CDS-001

Protein length: 503 aa.
Product: High-affinity nicotinic acid plasma membrane permease, putative

>YALI0D12100g_CDS-001 MSTHSVRDSVTHSLKEDAEIHIQSVHPTINEKKVTRKIDLRIVPILSILYLMSFLDRGNI
GNANIEGLSTDLGLTGPQYNMCLTVFFFTYSVFEVPSNMMLKRLKPSIWLPAIMVAWGIV
MTLMGIVQNYGGMLATRIFLGLTEAGLFPGVTYYLTLWYPRRDIQFRTAMFFSAASVAGA
FSGLLAFGIGKMDGVGNLEGWRWIFILEGIATTLIAALSFFLVVDFPDTAKFLTDEEREW
VLWRLKYDTNSRKTNSASQQAIMVEENDSHSWDEVKKAIMDPQLYPQCLLYSAVLVPLYG
VSLFLPTIVKNLGYSSEGAQLMTIPIYAVGAIASIVQAWVSDRYGWRSPLLVFNFCCMFI
GYMLAMNVSAVRNPSATYAGCYLVALGLYPGIPAVISWLSNNTAGTYKRGVSMGMQIGFG
NLCGAIASQIYRSKDAPQFKLGHGIEVMFICIGFICIFVLNLYYYLVNRNRRRMVAEGKA
DDLTVTQLSEMGDKSPHFIYSH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG