YALI0D12078g

Overview

Description some similarities with uniprot|Q99326 Saccharomyces cerevisiae YOR338W (ohnolog of YAL034C) Putative protein of unknown function
Locus type CDS
Locus tag YALI0D12078g

Location

Species Yarrowia lipolytica Positions 1498324..1499738
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1415 (nuc.)
Previous locus YALI0D12056g Next locus YALI0D12100g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12078g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12078gYALI0D12078g_mRNA-001YALI0D12078g_CDS-001

Nucleotide sequence

 

>YALI0D12078g
ATGATGCGACTCACTGAAGATAGTGTTCTGCTGTCGCCTCCCCAGTCTCCTTACTCGCGG
GAAGTCCAGCTGGCCGAAAAGCCCACCTCTTGTCCCCGAGACACAAACAGCACAAACAAC
AGCGACGCTCTGGCCAACGCTCTTGCTGTGACTCTCAACTCGCCCGTGCTCAGCCAGAAT
GCTCTTTCCAGCATTCGGGACTCTGCCGAGTGGTCTGAGCGGGTGTTTGCCACCCCTCCT
CCTTCCTCTGAGAAGCGAGCCGGAGAGGACTCCCAGCTTCGAGATGTCAAGCGACCCAAG
CTCATGCGAGAGCCCTCTCTGCAGCAGGTGCCTCGAACGGTCCCCACCTCGGCCCCCATC
ACTCTGTCCGGAAACGCCGTGACCTTCAGCTCCAGCATCTTCACCACCATTGCCAAGGAC
CCTGCTGGGTTCCGGCGACGAGAAGACGCGTTCCTGGACTTTTACCAGCGAGCCCCTTCA
TCTTCTCTGCGTTCGTACAACAACGCTACCTCTGCTGCCGCAGCTCTGCTTAAGAAGCGG
GCCGCCACTACCGCTGCCGCCTCTTCCCGAGCTTCGGGCCGTCGATCTGATGACGGAGGA
TACTCCAGCACCGGCTCTGTGACTCGAAGCATGACCTCTCGAGCTGCCACCTCCTCCACC
ACTCGACCCCAGCGGGTTCTCCCCCAGCGAGTCCGAGAGGTGGCCAACGGAAGCTCTTAC
AAGGCTCGATCTTCTTCGCCTGCTCCTGCCTCCTCTCCTCGAGCTACTCCTTCCCCCAAG
AAGCGAGTCGTGGCTCCTCCTTCCTCCTCCCCTGCAGTTCCCTCGCGTGTCCATGACACC
GACTACGCTGACCTGCCTGACTACTGTCCCTCCACTGATAGCCTTCCTACCAGTGGACGA
CCTCTCAAGGCAGAGTGGAAGGGAGCCCCCATGGATCTGTCTGACGATCCTATGCTCGAC
AAGCTGCATCCTGCCGAGGTCTACCTGGCTAGCTGTCTGCGACTTTCGTGCGACACCTAC
CTGGACTCCAAGCGACGGCTTTTTGCTGAGAAGGTCCACCGACTCAAGTTTGGCCTGCCC
TTCCGACGAACCGATTCGCAGAAGGCTTGCCGAATTGACGTCAACAAGGCCTCGCGACTT
TTCTCTGCCTACGAGAAGGTTGGCTGGCTGGACGATGAGCTGTTTAAGAAGTTTTTGTAA
GTCCTGAGGAGCTACAGGGCTGACACTAACGATTGCATTGAACATTTTTGATATTTATTT
GGGACATTTTGGGTAATTACGGTTTTTTACATTATTTGGTTTCGGTTTTTTATGAGGGAT
ACCAGGGCATTGGATCCTCTCACGGTTTTTATTTGGGTTATTATTAACGGTTTAAGTGTA
TTATTACTAGAGTAACATATTATTAGAGAGTTATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12078g_CDS-001

Protein length: 400 aa.
Product: Conserved hypothetical protein

>YALI0D12078g_CDS-001 MMRLTEDSVLLSPPQSPYSREVQLAEKPTSCPRDTNSTNNSDALANALAVTLNSPVLSQN
ALSSIRDSAEWSERVFATPPPSSEKRAGEDSQLRDVKRPKLMREPSLQQVPRTVPTSAPI
TLSGNAVTFSSSIFTTIAKDPAGFRRREDAFLDFYQRAPSSSLRSYNNATSAAAALLKKR
AATTAAASSRASGRRSDDGGYSSTGSVTRSMTSRAATSSTTRPQRVLPQRVREVANGSSY
KARSSSPAPASSPRATPSPKKRVVAPPSSSPAVPSRVHDTDYADLPDYCPSTDSLPTSGR
PLKAEWKGAPMDLSDDPMLDKLHPAEVYLASCLRLSCDTYLDSKRRLFAEKVHRLKFGLP
FRRTDSQKACRIDVNKASRLFSAYEKVGWLDDELFKKFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG