YALI0D11858g - PEX24

Overview

Description uniprot|Q8NJX0 Yarrowia lipolytica YALI0D11858g PEX24 Integral peroxisomal membrane peroxin
Locus type CDS
Gene name PEX24
Locus tag YALI0D11858g

Location

Species Yarrowia lipolytica Positions 1469198..1470972
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1775 (nuc.)
Previous locus YALI0D11836g Next locus YALI0D11880g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11858g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11858gYALI0D11858g_mRNA-001YALI0D11858g_CDS-001

Nucleotide sequence

 

>YALI0D11858g
ATGTTCCGACGACTCACTGGATCGCAGTCGGAATCGTCCATCTACGGCCTGGTAAACGAC
TCCCAGACGTCCATGGGAACCATGGACTACGCCAACGAGCTGGCGTCCCAGCTGGACATG
TTGCTTAAGAAGGATAAGCCCCTCTCCACAGACGATTCTGCCAGTGTGGCATCTTCGTCA
GCAGCTTCTAGGACGTCGTGGCTCGGACCATCCATCCCACGCCACTCCCGGCACTTTGTC
GATGCCTTGTACGACAAGGTGATTCTTCCCAAGCTCAAGAAATCGATTATCGGAGATGTC
GATTCGGACCTCGGCTCGGCCGTGGCCACACCCACGGGCTCGGGATCGCGACGAGGGTCC
TTCAGTACGATCCGGGCCTTGGACATCTCGGAGGAGCCCTTTTCCGAGTCGGATATCTCC
GTTTTCGACGACTCTGTATCTGTTGCCTCTACCGCGTCCTCCGAGCCGTTCCGAATCTCG
CAACATAACCCCCCCAAACCGGTGTTTGACCCCGAAGCCCACGAGGCCGGTCCTGAATTG
AGTATCCCGCTGCTGCTGCGAAACATTGCCGAGCTCAGCAAGCGAGCCGGAGGCGTCATG
AAGACCCAGACCGTGGTTCTCAAGGCCATCCAGTGGCAGAACCCATGCCTATCCATCTCC
TGCATCTTCATCTATACCGCCATGTGCCTGTACCCCGGTATTGTCTTTGTGCTGCCTGGT
CTGCTCTTCATGTACGGCATCATGGCTCCAGCCTACGCCGAAAAACATCCTCTGCCCAAA
GAATACCGTCCCAGCCCGTGGACGGTCAAAAACGAGTTTGACATGGCTGCCGACGACGAC
ACGTCGATCCGAGCCGCACAAATCAAGCGAATCAAGGCCGCTGAAAAGAAGCCTGTAGAC
GTTAAGAAGAGTATGAAGAACTTCCAGAACGCCACCACTAACCTGATCAAGGCGCTTGAC
AAGCTCGAAAGCTTCCTGTCAGGACCCGCGGGATTTGCCAACGAGTCTCTCTCTGCTCTC
ATTTTCCTTTTGATTGGATTTGCCATGATTGGCACTTTTTTTCTGTCGGCCTTCATCCCC
TGGAAGGCTCTGCAGATTGGAGCTGGCTGGGGAGTCATTATTGCCGGCCATCCTACGCTT
CTCAAGCGAATCGTGGCTATTTTGGACGAGCTGGAGAAGTCTGACGACGAGGAGAAGCCC
AAGGAGTCCCCTGTTATTGCTATTCTGCAAAAGGTGCAGAAGAAGGAGTTCATTAACGAT
GAACCTCCTCAGGGAGAGACGGTCGAGATCTTTGAGCTTCAGCGACAGGGCTTGACTCCC
CGACAATGGGACTCTTGGGTGTTCACATCCTTGGTTTACGACCTGGGTTCTTCCTGGAGA
CAGGCCAAGAAGCGGCCTCCTGGGGCACCCTTTTTGGGCGACGTTGAGGCCCCTGAGGGA
TGGCTGTTCTCAAAAATGCATGATTGGGAAGTGGACATGAACCCCAATGAGTGGGTTGGA
GAGCGAGGGCTGGGACGATGTACGGAGATGGACAACGACGAGTGGGTCTACGATGTGGAG
AAGGGAGTGAGAGGAGAGTGGCGGCGACGACGGTTCATTCGAACCGCTTTCAAGGAGAGC
ACCGTTCCCAAGGAGTTGTTGGGCCTGGTTTAATTTATACAACATTGTCGAGCGAGTGCA
CGACTGCTGATTTGAAACCTCGGACAAATGTAATAGCCCGTTGGACTTGGAGTTCAGCGA
CGACTAAGTAATGATATCAATGGTAAGTTGCGGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11858g_CDS-001

Protein length: 551 aa.
Product: Integral peroxisomal membrane peroxin
Gene: PEX24

>YALI0D11858g_CDS-001 MFRRLTGSQSESSIYGLVNDSQTSMGTMDYANELASQLDMLLKKDKPLSTDDSASVASSS
AASRTSWLGPSIPRHSRHFVDALYDKVILPKLKKSIIGDVDSDLGSAVATPTGSGSRRGS
FSTIRALDISEEPFSESDISVFDDSVSVASTASSEPFRISQHNPPKPVFDPEAHEAGPEL
SIPLLLRNIAELSKRAGGVMKTQTVVLKAIQWQNPCLSISCIFIYTAMCLYPGIVFVLPG
LLFMYGIMAPAYAEKHPLPKEYRPSPWTVKNEFDMAADDDTSIRAAQIKRIKAAEKKPVD
VKKSMKNFQNATTNLIKALDKLESFLSGPAGFANESLSALIFLLIGFAMIGTFFLSAFIP
WKALQIGAGWGVIIAGHPTLLKRIVAILDELEKSDDEEKPKESPVIAILQKVQKKEFIND
EPPQGETVEIFELQRQGLTPRQWDSWVFTSLVYDLGSSWRQAKKRPPGAPFLGDVEAPEG
WLFSKMHDWEVDMNPNEWVGERGLGRCTEMDNDEWVYDVEKGVRGEWRRRRFIRTAFKES
TVPKELLGLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG