YALI0D11836g

Overview

Description similar to uniprot|P38176 Saccharomyces cerevisiae YBL089W AVT5 (ohnolog of YER119C) Putative transporter
Locus type CDS
Locus tag YALI0D11836g

Location

Species Yarrowia lipolytica Positions 1466722..1468189
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1468 (nuc.)
Previous locus YALI0D11814g Next locus YALI0D11858g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11836g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11836gYALI0D11836g_mRNA-001YALI0D11836g_CDS-001

Nucleotide sequence

 

>YALI0D11836g
ATGACCCAAGCGGAACCCTCGTCGCGGCAAAGCACAGACATGCAGTACGGATCCGTTCAC
TCAGAGCCGCTGGAGCCGGTATCTTCGGCCTACCAAGCCACAGGAACCATCATGTCGTCG
GTGATCAACCTGGTGAACACCATTGTTGGCGCGGGCATTCTGGCCATGCCGTTTGCGCTG
AGGCAGAACTCGCTTTTCCTGGGCGTCTTTCTCATTATCATGTCCGGCTCTCTGTCGGGC
TTTGGTCTTTTCCTCCAGGGCCGATGTGCATTCTACGCTCCCGCTAGACAGGCGTCCTTC
TTTGCGCTGGCATCCCAGACCTACCCGTCGCTGAGCGTCATCTTCGACATTGCCATCGCC
GTCAAGTGTTTCGGTGTTGGCGTCTCGTACCTCATCATTGTGGGCGACCTCATGCCCCAG
GTGGTGCAATCACTGTTCAACCCCGGAGATAACACGCAGTTTATCGTGAGCCGCGAGTTT
TGGATTCTGGCGTCCGTCGCCATCGTCGTTCCGTTGTCGTACCTGCGAAAAATCGACTCG
CTCAAGTACACGTCGCTGGTAGCGCTCATCTCTGTGGGCTATCTCATTGTGCTGGTGGTG
GCCTACTACCTCTTCTCGGACATTTCCTCCACCCGCGCTCCCATCTCGCTCTTTAAGCCC
GCCAAGATCTCCAACGTGCTATCTTGCTTCCCCATCATTGTCTTTGCATTCACCTGCCAC
CAGAACATGTTTTCCATTGTCAACGAGCTGCAGCACCGAACCGCCGCCAACATCAACCGA
GTCGTTGCCACCTCCATCTCCTTCTCGGCCTTCTGCTACTGCCTCGTTGGAGTCACGGGC
TACCTGTCCTTCGGAAACATTGTGTCTGGAAACATTGTGTCTATGTACCCATCGTCTGTC
GCCACTGAGATTGCTCGTTTTTGCATTGCGTTCATGGTGGTTCTGTCATACCCGCTACAA
TGCCACCCCTGCCGAGCCTCGCTGGACCATACCTATTCGTGGTTTCAGTCCAGCGGATTT
GTCAAATCTTTGGCACACAAGGTGTCCTGGAGCAGACTTCCGTCTTCGGAAGAAGAGATG
GTTCACCCTACTAGCGGCGGCCAACCCGGTTCCATGACCACCGCACGGTTTGGAATCGTA
ACCACTATCATTGTGGTAGCCAGTTACATCACCGCTTTGACTGTGGAGTCGCTGGAACTC
ATGCTGGCGTTTGTGGGAAGCACAGGCTCCACGTCCATCTCGTTCATTCTGCCCGGTCTA
TTCGCCTACAAGCTGATTGGAGCAGACGCGAGCAACTCAGAAGACTGGCTCAAATGGTCC
GGCCTGGCATTGTGTCTGTACGGAGTTCTTGTCATGATTGTCTCGTTAGGCATCAACATC
TACCTGTTGCTCTGAAGCGGTTCAGCAGTCCAGACACACATCACTGTCATTACACGTGAT
TAGTACAGTAAATATACGGTTAGGGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11836g_CDS-001

Protein length: 465 aa.
Product: Transporter, putative

>YALI0D11836g_CDS-001 MTQAEPSSRQSTDMQYGSVHSEPLEPVSSAYQATGTIMSSVINLVNTIVGAGILAMPFAL
RQNSLFLGVFLIIMSGSLSGFGLFLQGRCAFYAPARQASFFALASQTYPSLSVIFDIAIA
VKCFGVGVSYLIIVGDLMPQVVQSLFNPGDNTQFIVSREFWILASVAIVVPLSYLRKIDS
LKYTSLVALISVGYLIVLVVAYYLFSDISSTRAPISLFKPAKISNVLSCFPIIVFAFTCH
QNMFSIVNELQHRTAANINRVVATSISFSAFCYCLVGVTGYLSFGNIVSGNIVSMYPSSV
ATEIARFCIAFMVVLSYPLQCHPCRASLDHTYSWFQSSGFVKSLAHKVSWSRLPSSEEEM
VHPTSGGQPGSMTTARFGIVTTIIVVASYITALTVESLELMLAFVGSTGSTSISFILPGL
FAYKLIGADASNSEDWLKWSGLALCLYGVLVMIVSLGINIYLLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG