YALI0D11792g

Overview

Description weakly similar to uniprot|G3APB8 Spathaspora passalidarum hypothetical protein SPAPADRAFT_61174
Locus type CDS
Locus tag YALI0D11792g

Location

Species Yarrowia lipolytica Positions 1461185..1462517
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1333 (nuc.)
Previous locus YALI0D11770g Next locus YALI0D11814g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11792g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11792gYALI0D11792g_mRNA-001YALI0D11792g_CDS-001

Nucleotide sequence

 

>YALI0D11792g
TCCGATATCACTAATGAGCACCGTACCCAACGACCGAGAAATCGTCCAGGCCGTGGTCGA
CATCTGGCGCAAAGACAAGGCCACCGAAAAGCTCGGGGCCGCGAAGCTCACAGGACTGGT
GAAGCTGACCCACTCGGACTGGCAGTTGAGTGAAAAGCGAGTCAAGACGGTTATGAAGGC
TGCCAACCTGGGTCTGAACCAGGAAAAGTTCTGCTACGCGGGGTCTATTATGTCGCACGC
GACTCCAGGGCTCGATATGCCTGAAAAAGTGACCCTCAACATTGCCAAGAACCGAGGCAA
GGGCCTATATGCCAAGAAGGATATCAAGAAGGACGAGGAGCTGTGGAACGAGCAGGCGTT
TCTGCTGGTTCCTCCTCTGGAGCATGTTGGTATCATGCGTAAGGGCATGGGCTGTGCCTT
TTGTTCGCGGCCCTTCCAGTCGCACAATGGAGTGGAATGTCCGTCTTGTGCTGCCAAGTG
GTGCGACAACCAGTGCAAGAAGAAGGACGTCACTCATGTGGCCATGTGGCACGAGAGTAG
GCATGGGAAAGTGACGAGGGTGGAGTGGCGTGCCTTTGAGGACTTCTGTGTGGAAAATGG
CTGGATGGCTCTGTATGCTCTGGGCCTACTGTGGCTGCGGGTCATCAGAGACCCTAAAAA
GGACGAGGTGCAGAAGCAGATGATGGCGTTTGCGCGGGTCGGCCAGGATGAGCGCCACAA
GGCCGTGGAGCAGTCCAACTCACTGTTTGCGTCCGAGCAGTCTGAGGTGCTGTGGAAGAA
GGGCTACGAAATGCTGGACAAGCTACTATTGGACACGGAGTTTTCTTACGAGAAGGACTT
TCTGCCCGGACTAGGCATGTTCAACATTAACAACGTGGACGGAAACATGTACTTAACCCA
GAGTCATCTCAACCACTCGTGCGAACCCAATGTGGATGTCAAGAACGTGGGCCGAACGCA
GGGCATTTCTGTGCGTGCCAAGCGAGATATCAAGACCGGAGAAGAACTGTTCACCACGTA
TGTAAACCCTGAGCACCAGTTGGATGACCGACGATACAATCTGCGAGTCAACTGGGGCTT
CAACTGCAACTGTACCCGGTGCAAGAGGGAGGAGAGAGAGGAGATGGAATACCTGGACGA
GCTGGTGTCCAACTGGACCATTGAGCACAAGCGCAAGGAGATGAAGGAGGAGAAGAAGGA
GCGAACTCGAACCAGAACCCGAAGTGTTCATTTCGATAAGGAGCCTGAGGTGGTGGCATG
ATGAGGGGAGACGGAGTGAATAGGACCGTGTACCTGGGTAGGGCTATATTGCAATGAGAT
ACGCATGGGTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11792g_CDS-001

Protein length: 416 aa.
Product: Conserved hypothetical protein

>YALI0D11792g_CDS-001 MSTVPNDREIVQAVVDIWRKDKATEKLGAAKLTGLVKLTHSDWQLSEKRVKTVMKAANLG
LNQEKFCYAGSIMSHATPGLDMPEKVTLNIAKNRGKGLYAKKDIKKDEELWNEQAFLLVP
PLEHVGIMRKGMGCAFCSRPFQSHNGVECPSCAAKWCDNQCKKKDVTHVAMWHESRHGKV
TRVEWRAFEDFCVENGWMALYALGLLWLRVIRDPKKDEVQKQMMAFARVGQDERHKAVEQ
SNSLFASEQSEVLWKKGYEMLDKLLLDTEFSYEKDFLPGLGMFNINNVDGNMYLTQSHLN
HSCEPNVDVKNVGRTQGISVRAKRDIKTGEELFTTYVNPEHQLDDRRYNLRVNWGFNCNC
TRCKREEREEMEYLDELVSNWTIEHKRKEMKEEKKERTRTRTRSVHFDKEPEVVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG