YALI0D11770g

Overview

Description highly similar to uniprot|P33298 Saccharomyces cerevisiae YDR394w YTA2 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0D11770g

Location

Species Yarrowia lipolytica Positions 1459225..1460599
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1375 (nuc.)
Previous locus YALI0D11748g Next locus YALI0D11792g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11770g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11770gYALI0D11770g_mRNA-001YALI0D11770g_CDS-001

Nucleotide sequence

 

>YALI0D11770g
ATGACCATAGAAATTGCGAAACCTGCCGGCGAGCATTCTCTACCTTCCTCGGCGACCCCC
GAGGACTATTACCGTCGATTGAAGCAGCTGGAGCGGGAATACGAACTTATCTCTCTTCAG
GAAGAGTACATCAAAGACGAGCAGCGCCACCTGAAGCGCGAGCTGGTGCGAGCCCAGGAG
GAGGTCAAGCGGATCCAGTCGGTGCCACTGGTGATTGGACAGTTTCTGGAGCCCATTGAT
CAACAAACAGGTATTGTGGCGTCCACCACCGGCTCCAACTATGTCGTGAGAATCCTGTCC
ACACTCGATCGGGAGCTGCTCAAGCCCTCGTCATCGGTGGCGTTGCATCGACACTCCAAC
GCGCTGGTCGACATTCTGCCTCCGGAGGCTGATTCGTCTATCGCCATGCTGCGGCCTGAT
GAGAAGCCCGATGTCTCCTACGCCGACGTGGGAGGCCTTGACATCCAGAAGCAGGAGATC
CGGGAGGCTGTGGAGCTGCCTCTAACACAATTTGAGCTCTACAAACAGATTGGTATTGAT
CCTCCTCGAGGTGTTCTGCTTTTTGGCCCTCCTGGAACCGGCAAGACCATGCTGGTCAAG
GCGGTGGCAAACAACACCACGGCATCGTTCATTCGAGTGGTGGGCTCCGAGTTTGTGCAA
AAGTATCTGGGAGAGGGTCCTCGAATGGTCAGAGACATTTTCCGACTGGCCCGAGAAAAC
TCGCCATCCATCATTTTCATCGACGAGATCGACGCCATCGCCACGAAGCGTTTCGATGCA
CAGACCGGTGCCGACAGAGAGGTCCAGCGTATCCTGCTGGAGCTGCTCAACCAGATGGAC
GGTTTCGACCAGACCTCCAACGTCAAGGTGATCATGGCCACCAACCGAGCAGACACACTG
GATCCTGCTCTGCTGCGTCCCGGTCGACTGGACCGAAAGATCGAGTTCCCCAACCTGCGA
GACCGCCGAGAACGACGTCTGATTTTCTCCACCATCGCCTCCAAGATGTCTCTGGCTCCC
GAGTGTGACCTGGACGCTCTCATCATTCGAAACGACCCTCTTTCTGGTGCCATCATCGCG
GCCATCATGCAGGAGGCCGGTCTGCGGGCCGTTCGAAAGAATCGATACGTCATCATCCAG
AGCGATCTGGAGGAGGCCTACTCTGCCCAGGTCAAGGTGGGAAGCGACAAGGACAAGTTT
GAGTTCTACAAGTAAACCACTTGCGAGTGCCATAGACAGCGCAGGGAGATGGAGCGGGAA
GTTATAGGTATATACATTGCATTTTCATGCTTAGAATGATAAAACAGTTGATGTGACTCG
TGAAAATCGGGATAAGTTTTTTTAAAATTACTCACAAGTAATTAATTCTCATAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11770g_CDS-001

Protein length: 405 aa.
Product: 26S proteasome regulatory subunit, putative

>YALI0D11770g_CDS-001 MTIEIAKPAGEHSLPSSATPEDYYRRLKQLEREYELISLQEEYIKDEQRHLKRELVRAQE
EVKRIQSVPLVIGQFLEPIDQQTGIVASTTGSNYVVRILSTLDRELLKPSSSVALHRHSN
ALVDILPPEADSSIAMLRPDEKPDVSYADVGGLDIQKQEIREAVELPLTQFELYKQIGID
PPRGVLLFGPPGTGKTMLVKAVANNTTASFIRVVGSEFVQKYLGEGPRMVRDIFRLAREN
SPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSNVKVIMATNRADTL
DPALLRPGRLDRKIEFPNLRDRRERRLIFSTIASKMSLAPECDLDALIIRNDPLSGAIIA
AIMQEAGLRAVRKNRYVIIQSDLEEAYSAQVKVGSDKDKFEFYK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG