YALI0D10989g

Overview

Description weakly similar to uniprot|Q07527 Saccharomyces cerevisiae YDL112w TRM3 tRNA (guanosine-2 -O-)- methyltransferase
Locus type CDS
Locus tag YALI0D10989g

Location

Species Yarrowia lipolytica Positions 1374357..1378542
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4186 (nuc.)
Previous locus YALI0D10967g Next locus YALI0D11000g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10989g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10989gYALI0D10989g_mRNA-001YALI0D10989g_CDS-001

Nucleotide sequence

 

>YALI0D10989g
ATGCTGGATCTGCTCAAAAAACTGGATCAGCACACGCTGGGGAAACACGCGGATGAACTC
ACCGACCGCCTGGTCGGGGCGATCGGTCCCTCCGTGTCGGCTGACCTGGTGAACCAGGCC
AAGGACCTCCAGCTGCTGGAAGAGATCTTGACACCCCAGGTGTTCCAGGAAAAGGTGGCC
AATGTGGCCGATAAGTGCGCCGAGTCGATTGGTACATGCTCGGAATCAATCACCCTGGTC
TCGAGTCAGATCCCTCTGCTCTCCAGGCTGCTCTTTGACCATGCATACAACAACCTGAGA
TCATATGTGTCCCAACCTCATCTCAACTACCTGGTAAATGCGGATCTGCCTGCTGTGGAG
GAGTCGAATTCTGGCGGATCTGTTGACGTTGAGACCGCCGCAGTATCTCTCAAGTTCCTA
CAATCTCTTCTGCTCAACAACGACCTGGGTAACCCACAGCTGGACTCTCTGCTTCTCCAT
GTTGTCTGTCTGTCTGACTCTGATCTGGTCCATTCTGCTGCCGTGCTTCTCAAACTGAGA
ATGACCAATGTAGCTACAAGCGCCCTGGCGTCGTATCTGTGGACCATTGTCTCCGATCTC
GTCAACTCGTCCCTGGACGACCACAAGACCGTGGGATACAAGCTGTGGCTGTGGTGGCTG
AGTGCATGTGACTCTGCTACCCTCGAGTCCGAGACTTTCCAGTCGCTCTTCAAGACTGAC
CTTTACTGGGCCTGTCTCCTCAGGCCTCTTAAGACTACCTCCTACGACCACAAGAAGCTG
GCCCTGTACATCATCTCAAGATCTGTCCAGCATATTGTCAGCGACATTTCTCTGGAAAGC
ATGCAGTGGTCCACAACCGACAGAGATGTTCTGCTAGAGCAATGGAAACGTTTTGCTACT
CTCACCGAGATCATCGCCATTGACTCTTCCTACAACCAGACGGTGGCCTGTGAGGGAGAT
ATTCTCATGTTCCTCGGGCCAGAATGCAAGCTTGCTCCTCGTTGGGGTATCGCTCTCATT
GCCATGGGACTCAATGCTACCATGGACACCGTGCGGAAGTACATGGCCAAGGTTGTTCTT
GCTCTGCCAATTGCTTCTCTGGTTGTCTTTCAGCATGACATCCCTTTCTTGGAATCCAAG
CTGCTGCCTTATCTTCTCGAAGCTACCCATTTCCAGACTGCTAGACACGACGATCAGAAT
GTTTGCATCTACGGTGATACTCTGGAGACCTTTATCGAGGGTCTCTACACCACTTTTGAC
AAGTCTCGAATCGAAGCGCTAACCATCTGCATCTTCAAGCTGCTCAACATTCTGAGAGAA
GGATTCGACCCCTCCAAGATCTACGCACTAGCAGGCGTCATGTCTGGACTCAAGGCCACA
GAGTTCCAGCTGAGCGACGCAGCATTGGACGCCTTTGCTCCCATGCTGCTGCTCACGTCC
GAGACAGGTGTCCGACGAAAACTGCAGAAGCTGTACCTGGCTAGAATTTGCCTCCATTTC
GGCCAATCTCTGCGAGTTCTCAAGCTTCTGTCTCAGCTGGTTACCCTCGAGACTATCATG
ACTGGTCTCAACTTCAAGCTCACTCCAGATGCCGAGCTGCGAAAGTCGATTGAGGATCTG
TCCACGTATGCTGTCTACCTGTACGGTTCTTGTGAGACCTGCAATGTTGACGAGGCCGCT
GCTCAGCTCAATCTCCTTCCTGTGGGTGTTTCTCTGGGCCTGAAGAACATGGGTCTTACT
GGCGTCCCTACAGTCTCAGTTGACGATTCCATCCTCTCATCTATCCAAGCCACCCAGGCA
CTTGCAAAGTCCAATCTTTCGGAAACTAACACCGATTCCATCGAAATTCGGCTCGAAAAG
TTGAAGTTCCCTGACGATATGGATCTGACTGCTGCTCAGCTCACTCTTCTGGCTGCTCTC
AACATCAAGAACGGAAAGGGAGACTTTGCCAACACGTTCGAGTACCTCAAGTCTTCGCAC
ATTGTTTCGCGAGACCTGAAGACTGACCAGACTATCCAGTCGTTGAACAACCTCATTGCT
GCGAAATTCGACTGTCTCAACACTACTCTTGCTCATCACAGGGTCACCGAGCCGGTGGAC
GTGATCAACTTTGCTACTCTCAACTACTCCGTGGCTTCTTCGTGTGAGTCTCGCTACGCT
ATTGTTGCTTGCATCTACAGAGTGGTTGAGCAGCTCGATGCTGCCGACGAGAAGACCTGC
TCGGTCATCCAAGATACTCTGTTCACCATCTGGGACGAGATTATGAGTACCGGACTTGTA
TCTTCGGCCAAGCCTGTTCATTTGGCTTTCATCGAGCTGCTGCTGAGCAAGTCAGTTCTT
CAAAAGTGCACCGAGAACGACTCACTGGCTGAGACGGTTCTCGATATCGCCTCTACTCTG
GTATCTCAATGTTACGCTCGTCGATCTTTGCTTCCTCTGGTGGCCAAGAAGCTGCTTGAG
TTTGGAGGCACTGAAATCGTCAAGATTGAGGGAGCCCATTCTCTGGTTATCGAAATCTAC
ACTCTTCAGCAAATTGACGACACTAACTTCCGACTTGAGGATGCAATTGCTACTCGATAC
GATACCGAAATGGGTAATGACGGTGCGTCTGTGTTCAAGGATGTTCACGGAGGCAAGGAG
GTGGCTGCTCGGGCTCTGATTGCTGTTCTTGTCTCTCAGATCACCGACGCTGCCTTTGCC
GAGTTCATGTGGGACGAGATTTTCTCCTCTGATTCTTACCGACTCTTCAACCCCAAGAAG
CTCAACGACGGTAAGGAGGAGCGAATCCGGGTCCAATGCTACCAGCTTCTGACCATGACC
GAGGATATTGTTCATCACGAGTTTTCCCAGGAGGAGACGGAGAAGCTTATTGAGCACATT
CGCTTTGAGCCCTCTCCCATTGTCCGAATGTACATGGAGTGGATCATTGCCCGTGTAATT
CTCAAGGGCGATAGTCTGGTGATTCTTAAGAAGCATTTGTCCAACCCTGAGGAGATCCCC
CGAGTACTGGCTGCCTTCCAGCGAATCGGTCTGCTGATTGGTGAGCAGATTGAGAACGTG
GACGACCGCATTTCCTACCTCACTGAGTACCTCAACATTGTGCTTCCTTTCTGCTCCTCC
AACCGAGCCGCCGTACGACACTTTGCCGTGTCCATGATCTGTGCTGTGGGTCCCTGGATT
CAGTCTGAGCAGTTCTGGAACGGCAACAAGAAGGCTCTCGAAACGATGGAGCCCTTCGCT
CGAATCTGTATGGGCATTTTTAGCCACGCTACTCGGCAGGAGGCTTACCACCAATTCCGA
AGCGGAGAGAAGATGCTCTGGAACGTGCACCGATACTACAACCTCGTGGGCATCTGTGGA
GGACTTATTCTGCGTCTCAGTGACCGAGAGTTCCCCTTTGTTAGCGAGACTGACTTTGCT
AACCTGGAACTTGCACCTACCAAGCCCCATGTGGACCTTGTGTTCCCGCTGGAGCCTGCT
TCTGTGTCTCTGCCAACAGGTGACGAGCTGCGAGTATCAGTTGGAGCCCACGACAAGTCT
GTGTGGGCTTCTGAGGCTGCTGTGGCAGCTGCCTGTGGCATTGAGGTCTCATCTGTGTCT
GCTCCCGTTCAGACCAAGTCCGGAGCTTGGAACGCTACTTTGGTGGAGGACAACTCGGAG
GAGTCTCGAGCTGCCAAGATCAACCGAGGAGAGCTCATTCTGGTGGCTTCTCTGGTCGAC
AAACCCCCTAACCTTGGAGGTATCTGTCGACTTTCCGACGTGCTGGGTGCCCAACTGCTG
ACTCTCAACGACATTTCTGTGGCCAAGCATCCCCAGTTCAAGAACGTTGCTGTGACGGCT
GACCAGTGGATGCCCATGGCTGAGGTCAAGGTGGACGAGATTGCCGAGTTCATGCGGGCC
AAGAAACGAGAGGGGTACACTCTTATTGGTCTCGAGCAGACGGACCAGAGCAAGCAACTC
AACAAGGACTTTGTCTTCCCCAAAAAGTCTCTCATTCTGCTGGGCATGGAGCGAGAGGGT
ATTCCTGGTAACCTTCTGGCCGAGCTGGACTACGCGGTGGAGATTAAACAGATTGGAATG
ATCCGATCCATGAACATTCAGACCGCTGCTGCCGTCATTGTTCACGCCTACAGCATGCAG
CACTGTGCCTAGATGTATTATTAGAATGTATGATATTATGAAAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10989g_CDS-001

Protein length: 1384 aa.
Product: Conserved hypothetical protein

>YALI0D10989g_CDS-001 MLDLLKKLDQHTLGKHADELTDRLVGAIGPSVSADLVNQAKDLQLLEEILTPQVFQEKVA
NVADKCAESIGTCSESITLVSSQIPLLSRLLFDHAYNNLRSYVSQPHLNYLVNADLPAVE
ESNSGGSVDVETAAVSLKFLQSLLLNNDLGNPQLDSLLLHVVCLSDSDLVHSAAVLLKLR
MTNVATSALASYLWTIVSDLVNSSLDDHKTVGYKLWLWWLSACDSATLESETFQSLFKTD
LYWACLLRPLKTTSYDHKKLALYIISRSVQHIVSDISLESMQWSTTDRDVLLEQWKRFAT
LTEIIAIDSSYNQTVACEGDILMFLGPECKLAPRWGIALIAMGLNATMDTVRKYMAKVVL
ALPIASLVVFQHDIPFLESKLLPYLLEATHFQTARHDDQNVCIYGDTLETFIEGLYTTFD
KSRIEALTICIFKLLNILREGFDPSKIYALAGVMSGLKATEFQLSDAALDAFAPMLLLTS
ETGVRRKLQKLYLARICLHFGQSLRVLKLLSQLVTLETIMTGLNFKLTPDAELRKSIEDL
STYAVYLYGSCETCNVDEAAAQLNLLPVGVSLGLKNMGLTGVPTVSVDDSILSSIQATQA
LAKSNLSETNTDSIEIRLEKLKFPDDMDLTAAQLTLLAALNIKNGKGDFANTFEYLKSSH
IVSRDLKTDQTIQSLNNLIAAKFDCLNTTLAHHRVTEPVDVINFATLNYSVASSCESRYA
IVACIYRVVEQLDAADEKTCSVIQDTLFTIWDEIMSTGLVSSAKPVHLAFIELLLSKSVL
QKCTENDSLAETVLDIASTLVSQCYARRSLLPLVAKKLLEFGGTEIVKIEGAHSLVIEIY
TLQQIDDTNFRLEDAIATRYDTEMGNDGASVFKDVHGGKEVAARALIAVLVSQITDAAFA
EFMWDEIFSSDSYRLFNPKKLNDGKEERIRVQCYQLLTMTEDIVHHEFSQEETEKLIEHI
RFEPSPIVRMYMEWIIARVILKGDSLVILKKHLSNPEEIPRVLAAFQRIGLLIGEQIENV
DDRISYLTEYLNIVLPFCSSNRAAVRHFAVSMICAVGPWIQSEQFWNGNKKALETMEPFA
RICMGIFSHATRQEAYHQFRSGEKMLWNVHRYYNLVGICGGLILRLSDREFPFVSETDFA
NLELAPTKPHVDLVFPLEPASVSLPTGDELRVSVGAHDKSVWASEAAVAAACGIEVSSVS
APVQTKSGAWNATLVEDNSEESRAAKINRGELILVASLVDKPPNLGGICRLSDVLGAQLL
TLNDISVAKHPQFKNVAVTADQWMPMAEVKVDEIAEFMRAKKREGYTLIGLEQTDQSKQL
NKDFVFPKKSLILLGMEREGIPGNLLAELDYAVEIKQIGMIRSMNIQTAAAVIVHAYSMQ
HCA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG