YALI0D10307g

Overview

Description similar to uniprot|P53290 Saccharomyces cerevisiae YGR163W GTR2 Putative GTP binding protein that negatively regulates Ran/Tc4 GTPase cycle
Locus type CDS
Locus tag YALI0D10307g

Location

Species Yarrowia lipolytica Positions 1299350..1300373
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1024 (nuc.)
Previous locus YALI0D10285g Next locus YALI0D10318g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10307gYALI0D10307g_mRNA-001YALI0D10307g_CDS-001

Nucleotide sequence

 

>YALI0D10307g
ATGTCCGAAACAGCCATCATCAACGTGTCGTCGTTGGACCGTCCCAAGGTCCTTCTGATG
GGTCTCCGGCGGTCCGGCAAGTCGTCCATCTGTAAAGTCGTCTTCCACAACATGCAGCCT
CTCGACACTCTGTATATTGAGTCCACTTCCAAGCCTGTTGAAGAGGAGTTCAACTCGCTG
ATCGATTTCAGCGTGCAGGAGCTGCCCGGCCAGCTCAATTTCTTCGAGCCCGACCAATAC
ATTGACTCTGATCGGCTCTTTCAAAACGTCGGGGCTCTGGTCTACGTGATTGACTCTCAG
GACGAGTATCTCAACGCTCTATCCAACCTGCACAACATCATCGAGTACGCCTTCAAGATC
AACCCGGACATCAACGTGGAGGTGCTGATCCACAAAGTCGATGGCCTCAGTGAGGACTTC
CGTCTCGATACCCAGAGAGATATCATGCAACGAGTGTCAGACGAACTGGTAGACGCTCGG
CTGGACGACGGAGATGTCAAGCTCAACTTCCACCTCACGTCCATTTTCGACCACTCCATC
TACGAGGCGTTCAGTCGAATCATCCAAAAACTGATTCCTGAACTCCCGGTGTTTGAAAAT
CTGCTCAACGTTCTGTGTTCACATTCGCTGTTTGAAAAGGTGTTTCTCTTCGACGTCAAC
TCGAAGATCTACGTAGCTACAGACTCATCGCCCGTCGATAACCAGACTTACGAGGTGTGC
ACGGACTTTATTGACGTCGCTGTCGATCTGGACAATCTGTATGAGAATGGATCGGACTCA
AAGAGCTCGGAAAACACCCTCAAGTGTGTGTCCAAGCTGCAAAACGGAGTCACGTTGCAT
CTGCATCAAATGGTCAAGGGTCTGGCTCTGGTGGGTCTGATCAGAAAGGAGAATGGCCAA
AAGATGGCCCTGGTGGACTACAACGTCCAGGTTTTCCGCGAAGGACTGGAGCGAATCTGG
GGGATAAACAAAAAGTAAATGCATTGCACAAACCATCCATAGATATAATTTATTGTCACA
TATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10307g_CDS-001

Protein length: 326 aa.
Product: GTP binding protein, putative

>YALI0D10307g_CDS-001 MSETAIINVSSLDRPKVLLMGLRRSGKSSICKVVFHNMQPLDTLYIESTSKPVEEEFNSL
IDFSVQELPGQLNFFEPDQYIDSDRLFQNVGALVYVIDSQDEYLNALSNLHNIIEYAFKI
NPDINVEVLIHKVDGLSEDFRLDTQRDIMQRVSDELVDARLDDGDVKLNFHLTSIFDHSI
YEAFSRIIQKLIPELPVFENLLNVLCSHSLFEKVFLFDVNSKIYVATDSSPVDNQTYEVC
TDFIDVAVDLDNLYENGSDSKSSENTLKCVSKLQNGVTLHLHQMVKGLALVGLIRKENGQ
KMALVDYNVQVFREGLERIWGINKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG