YALI0D10285g

Overview

Description weakly similar to uniprot|P53971 Saccharomyces cerevisiae YNL023c FAP1 Shuttle craft like transcriptional regulator with 8 zf-NF-X1 zinc fingers and R3H domain
Locus type CDS
Locus tag YALI0D10285g

Location

Species Yarrowia lipolytica Positions 1296113..1298715
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2603 (nuc.)
Previous locus YALI0D10274g Next locus YALI0D10307g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10285g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10285gYALI0D10285g_mRNA-001YALI0D10285g_CDS-001

Nucleotide sequence

 

>YALI0D10285g
ATGTCCAACAACAGTCTAGGCGCCATACCAGCTTCGGATTCCGAGTCTGACGGTGTTTAT
GAACAAACAGCAAGCGAATTCGAGTCTGAAATTGAACTAGAAACCAACGAAAATGAGCAT
GAAAACAACAACGCCGAGTCTGTGGCGTTAGAAGATCTTTGTCTGAATGGAGCGGCTTCC
GAAGTTCCTTCTCTAGAGCAGAACGACGAAAACGACGTTTCAGACGTTTCAGAGGAAGAT
GACTCAGATGCCCACTCAGAAACCTCCTTCCAAGACATAACAGACCAGCTGATCGCCGAG
ATTTCTGCCGGCGAGTACCCGTGCCTCATTTGTACGGAAGATATCACACCCAAGTCCAAG
ATCTGGAACTGTCCTACCTGCTACAGAGTCTACGATATTGACTGCATCAGTGACTGGGCC
GGCCGAGGTCTCAAGGCTCCCATCCCGCCTGGAGAAGCCAACAAGAACAAGAGACCCAAC
TGGAAATGTCCCTCGTGTAATGGCGCGTTCGAGAAACAGCCCAAAACATACACCTGTTGG
TGTGGCAAGGTGCAGGATCCGTTCGTCAACGAACTGGTACCTCACTCTTGCGGCCAGACT
TGCGGTCAATCAATCGATTGTGTCCATGGCTGCTCGTCAGCGTGCCACCCAGGACCCCAT
GTTGAATGCTCAGCCATGGGACCTGTTATGTCTTGTGCCTGTGGACGATCTAGACGTCAG
TGGCCCTGTGTGCTTACTCCTTACAAAGGCTGGAGCTGCGAGGTTGTCTGTGGCGAAATC
ATGCCCTGTGGAGAACACACGTGTTCGCGCCAGTGCCACACAGGTCTCTGTTCGGTCTGT
GTGGAAACTACTCCTGCCAAATGTTTCTGTGGAAAGACTGAGAAGAATATCACGTGTCAT
ATGGACGAGGAGATGCAGAACCAGAACGGTCGGTACTCGTGCGAAGATGTCTGTGACACA
CTGTTTGACTGTGGTATTCACAAGTGTGAAGAAATCTGTCATCCGTTTGTCTCCCATGAA
TGTCCTCTAATCCCCTCCAGACAGACTCACTGTTACTGTGGCCAAACCAAGAATGAAGAT
CTGGGCATTGAGCGGACTAAATGTACAGATGCAGTGCCCACGTGTTCTCTGACGTGCTCT
AAAACCCTCTCTTCTTGTGACCACAAGTGTCCCCAAAAATGTCACTCTGGAGACTGTCCT
CCTTGCAAGGAAACAGTCAAGATGCACTGCTCCTGTGGCAGGCAGACCTTCTCTGTTCCC
TGCGGCACCTCAGAAACCCCCAAGTGTACCCACAAGTGCGCAGCTCTCCTGTCGTGCAGA
AAACACTACTGCATGGACGAGTGTTGTGAATGGGAGGCTGTGGCTATCCAGCGAGAGAAG
CAACGCAAGAAAACAGGCGCACAGATCCCTGTCGAAGAGCCCAAGCATCATTGTGAAAAG
AACTGTAACCGACTCCTCAAATGTGGCATCCACAGGTGTCCAGATAGATGCCACTCAGGA
GCCTGTAAGCCCTGCATGCAGGCCACCTCCTGGGACGACGTCAACTGTCCCTGCGGCCGA
ACTACCACCTACGCTCCTATCCGGTGTGGCACTGCTCTCGAGGTGTGTGCTTGGCCCTGT
GAACGAGATCCTCCCTGTGGACATCGACGTATCCAACACACGTGCCACAGCGACTCGGAG
CCTTGTCCTCCCTGTCCGGTGCTCATGAACAAACCCTGTCAGTGCGGAAAGAGCACCGTG
AAGGGTGTTCGATGTTTCCAGACCCAGGTCACGTGTTCTCAAACCTGTGGAGAGCTGCTA
GCGTGTGGAGTTCACAAGTGCTCGAAACACTGCCACGTACCCGGCGAGTGTGAAGAGTGC
ACCCACGGTTGTGGCAAGACTCTCAGCTGCGGTCACGTGTGTAAGGCTCCTTGTCACGCT
CCTTTCCCCTGCGACGAGTCTGAACTGTGCAAGGAGAAGGTCGAGGTCACGTGCGAGTGC
GGCAATATTGTTGAGGAGCGTGAGTGCGGTGGTTCCAAGTCAACCAAGCGGCATGAGGAG
GAGCTTCCCTGTTCGGCCGACTGTTACAACAAACAGCGACTCAAGAACATGGCTGGAGCT
TTGGATATCGCTGTGACACGATCGGGTGAGCGAGTCATTGACTATGCGGCCATCATGTTT
GAATACCCCGAGGAAATCATTGACTTTTACAGACAGGAGCCGTCATTTTGCATTGAGATG
GAGCAAAAGATTGCAGCTCTGGTGAACGATGAGTCGAAGAAGGTTCTGAGGTTCCCGCCC
ATGCACACAGCTCAACGAGCATTCTTGCACCAGCTGGCTGAGGTATACGGCTTTACCTCC
ATTAGTCAAGATCCTGAGCCGTATAGATCTGTTTCGATTATGCAGAACTTTCCCTACGCC
GCCAAGCCTCCTATCACCATCAGGGATTGTGTCATGAGGAGAAACAGCTCTGTCTAGCTG
CGGAAGAGATGCGAAGGAGCTCTGTAGCAGCGCATACAAAAAAAAACTCTTTGCTCTGTC
TACCAGCAGCAACTGCAGGTCATAGCTCTGTCCACTTTGTAACAGCTTGTACTTGTATAT
GCATTAATAAATTGATATTTATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10285g_CDS-001

Protein length: 819 aa.
Product: Conserved hypothetical protein

>YALI0D10285g_CDS-001 MSNNSLGAIPASDSESDGVYEQTASEFESEIELETNENEHENNNAESVALEDLCLNGAAS
EVPSLEQNDENDVSDVSEEDDSDAHSETSFQDITDQLIAEISAGEYPCLICTEDITPKSK
IWNCPTCYRVYDIDCISDWAGRGLKAPIPPGEANKNKRPNWKCPSCNGAFEKQPKTYTCW
CGKVQDPFVNELVPHSCGQTCGQSIDCVHGCSSACHPGPHVECSAMGPVMSCACGRSRRQ
WPCVLTPYKGWSCEVVCGEIMPCGEHTCSRQCHTGLCSVCVETTPAKCFCGKTEKNITCH
MDEEMQNQNGRYSCEDVCDTLFDCGIHKCEEICHPFVSHECPLIPSRQTHCYCGQTKNED
LGIERTKCTDAVPTCSLTCSKTLSSCDHKCPQKCHSGDCPPCKETVKMHCSCGRQTFSVP
CGTSETPKCTHKCAALLSCRKHYCMDECCEWEAVAIQREKQRKKTGAQIPVEEPKHHCEK
NCNRLLKCGIHRCPDRCHSGACKPCMQATSWDDVNCPCGRTTTYAPIRCGTALEVCAWPC
ERDPPCGHRRIQHTCHSDSEPCPPCPVLMNKPCQCGKSTVKGVRCFQTQVTCSQTCGELL
ACGVHKCSKHCHVPGECEECTHGCGKTLSCGHVCKAPCHAPFPCDESELCKEKVEVTCEC
GNIVEERECGGSKSTKRHEEELPCSADCYNKQRLKNMAGALDIAVTRSGERVIDYAAIMF
EYPEEIIDFYRQEPSFCIEMEQKIAALVNDESKKVLRFPPMHTAQRAFLHQLAEVYGFTS
ISQDPEPYRSVSIMQNFPYAAKPPITIRDCVMRRNSSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG