YALI0D09911g

Overview

Description similar to uniprot|P53201 Saccharomyces cerevisiae YGR002c
Locus type CDS
Locus tag YALI0D09911g

Location

Species Yarrowia lipolytica Positions 1252117..1254043
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1927 (nuc.)
Previous locus YALI0D09889g Next locus YALI0D09933g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09911g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09911gYALI0D09911g_mRNA-001YALI0D09911g_CDS-001

Nucleotide sequence

 

>YALI0D09911g
ATGGCGTCTTCTTCCGATGTTAGAGACGTGCTGGACCTGCCGGACCTGGAGCCCAACGAC
AAGCTGACTCAGCAGCCCAAGCGACAGAAGCTGGCGGCTCCCGTAGGCGGCAAGAGGATG
GACGGAATGCAGCGAGAGCTGTTCGCGCTCATGGGTGAAAACACGCCGTCTGTGTCCGTG
ACCAAGGATTCGCACACGTCGCTTTTCAAGGACAAGCCCCAGTGGCAGGCCAAGTTGACC
CCGTGGATGTGGACTCCCTTCCAGAACCAGGCACGAGAAGATGGACTCATTTTGAGCCAC
TGGGTTCGAGGAGGCGAGCTCACTCAGGGCGACCAGTATCCGTTTGCGGCTCTCAACACG
CAGATTTCTTTCCCCGAGCTGACGCAGGAGGACTACGATGGTCTCAAGCTGGCTACTCCA
GGCTGGACTCTGGAAGAAACCAGGTATCTGATGCATCTGTGTTCGGAATTTGATTTGAGA
TGGCCCGTTATCCACGACCGGTGGGAGTGGCAAACTGACCAAGATGTGACTATGGCAACC
GGAGAGACCAAGGGTGCTGAAGGAACAGAGTCCAAGGTCAAGGAGGAGGATAAGGATGTG
GAGATGGCAGATGTGAAAGAAGAGAAGGAGAATAAAGATGAAAGCAACAAGGAGAAATCG
GAAAAGAAGGAATCGGCGCCCCCAGACGGAACCGCAAGAACGGTCGAGGATCTTAAAGAA
CGGTTCTACAATGTTGTTTCGGCCATGTCCAAGCATCCCGAAAAGTACACTGCTGAAGGA
TACAATATGACCACCGTCAAGTTCCCCCGGGACATGGAAATCAAGAGAAAGCAATACCTG
GAGCGTTTGCTGGCGCGGTCTCCTGCTGAAATTGCTGAGGAGGAGGCTCTGATTCTCAAG
TCGAGGAAACTGGAACTCAGTGCTACCAAAATGCTTCAAGAACGACAAGAGCTGCTCAAG
CTGCTGGATGCTCCTCAGCCCACATCTAGTGTCGCGCAGTTCCAGACGTCCCAGGGTCTG
GCCCATCTCACATCTACGCTCAACGACAAATCCAAAAAGGGTGGGAAGCCTACCAAGGAG
GGATCTGTGGGTCCTCAGGCACCGGATCGAGGAGGCTCCGTGGAGAAGACCACCAAGAAG
GAGGACACCAAGGAGGCAAAGAAGGCCACTAAGGAGGACAAGAAGGCCGCCACCACAATC
GCCGCTGCCATTTCCAAGAAGCTGACTACCAAGGAGGAGGCTGCATACGGCATCTCTTAC
CACGACAAGCTGACGCCGGGCGTCTACCTGCGGTCTTCAAAGGTGACCACGTTCAAGCCC
ACCATCCAGACGAAAATTGTCGCAGCTCTGCAGGACATTGGTATTCCTCCAAAGCCAGTC
ATGCCTACGGCCAAGGTATGTGCCAAGTTTGAAAGTATCCAGCACAGCATGAGCGTGTTG
CTGGAGACCAAGCGGGCCGCCGATAAGCTGGAAACCGAGATCCGGCTTCTTCGCGGTCAG
AAGGGGCAGCTCTAAACGAAGAACTGCGGTCAGGTGACACAACTTTTTCCATCTCAGGGT
GTGTCGCGTGTGCTTCATCCAAACTTTAGTTGGGGTTCGGGTTCGCGCGAGATGATCACG
TGCCCTGATTTGGTGTCGTCCCCCGTCGCGCTGCGCACGTGATTTATTTATTTCCGGTGG
CTGCTGTCTACGCGGGGCCTTCTCTGCCCTTCTGTTTCAACCTTCGGGCGGTTCTCGTAA
CCAGCAGTAGCAATCCATTTCGAAACTCAAAGAGCTAAAAACGTTAAACCTCAGCAGTCG
CTCGACGAATGGGCTGCGGTTGGGAAGCCCACGAGGCCTATAGCCAGAGCCTCGAGTTGA
CAGGAGCCCAGACGCCTTTTCCAACGGCAACTTTTATATAAAATGGCAATGTATTCATGC
AATTGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09911g_CDS-001

Protein length: 505 aa.
Product: Component of the Swr1p complex that incorporates Htz1p into chromatin, putative

>YALI0D09911g_CDS-001 MASSSDVRDVLDLPDLEPNDKLTQQPKRQKLAAPVGGKRMDGMQRELFALMGENTPSVSV
TKDSHTSLFKDKPQWQAKLTPWMWTPFQNQAREDGLILSHWVRGGELTQGDQYPFAALNT
QISFPELTQEDYDGLKLATPGWTLEETRYLMHLCSEFDLRWPVIHDRWEWQTDQDVTMAT
GETKGAEGTESKVKEEDKDVEMADVKEEKENKDESNKEKSEKKESAPPDGTARTVEDLKE
RFYNVVSAMSKHPEKYTAEGYNMTTVKFPRDMEIKRKQYLERLLARSPAEIAEEEALILK
SRKLELSATKMLQERQELLKLLDAPQPTSSVAQFQTSQGLAHLTSTLNDKSKKGGKPTKE
GSVGPQAPDRGGSVEKTTKKEDTKEAKKATKEDKKAATTIAAAISKKLTTKEEAAYGISY
HDKLTPGVYLRSSKVTTFKPTIQTKIVAALQDIGIPPKPVMPTAKVCAKFESIQHSMSVL
LETKRAADKLETEIRLLRGQKGQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG