YALI0D09889g

Overview

Description similar to uniprot|G0RWP8 Trichoderma reesei predicted protein
Locus type CDS
Locus tag YALI0D09889g

Location

Species Yarrowia lipolytica Positions 1250993..1251558
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 566 (nuc.)
Previous locus YALI0D09867g Next locus YALI0D09911g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09889g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09889gYALI0D09889g_mRNA-001YALI0D09889g_CDS-001

Nucleotide sequence

 

>YALI0D09889g
ATGTCTCTCCACTACTTCCCCCCCATCAAGCCCTCCGCCCTTGCCGTCGGCACCATCTTC
TCCCACTTCTCCTCTTTGATTGGTTTCGCCCCCGTCATTGGCGACACCATCAAGCGAGCC
AAGGCCGCTGACACCCCCGAGGAGTTTGCCCGACAGAAGGAGAACAACGGCGTCCTCGCC
CTCTACGGATCTTCTCTGCTCGGCTCCGGTCTGCAGTCTTACGCCGTGTCGGCCCTGATT
GTCCTCACCGGCACCACCACCACTAAGGGTGCTGCCTACCTCGGAGGTCTCATCTTCGCC
GTCAACTCCATCCCCACCCTCGTCACCGGAATCTTCCAGGAGAACCGACCCGTCGAGTAC
CTCGTTGGCAAGACCCTCTCTGCTCTGCTGGAGACCGTTGGTCTTACTCTCACTCTGAAC
TGGTGGGGAACCCGAAACGAGACTCTTTCTCTCGCCAAGTAAGCTGTATATTAATGCATT
ATGATGATTCAAGGCCGTGTAACAGAAACAGCAGTAGCCGAACTTCATTGTCGCACTTTA
TAGTACAAGTAGCACTGTATTCCCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09889g_CDS-001

Protein length: 154 aa.
Product: Conserved hypothetical protein

>YALI0D09889g_CDS-001 MSLHYFPPIKPSALAVGTIFSHFSSLIGFAPVIGDTIKRAKAADTPEEFARQKENNGVLA
LYGSSLLGSGLQSYAVSALIVLTGTTTTKGAAYLGGLIFAVNSIPTLVTGIFQENRPVEY
LVGKTLSALLETVGLTLTLNWWGTRNETLSLAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG