YALI0D09735g

Overview

Description weakly similar to uniprot|P87139 Schizosaccharomyces pombe Zinc finger protein, zf-C3HC4 type (RING finger), protease associated (PA) domain
Locus type CDS
Locus tag YALI0D09735g

Location

Species Yarrowia lipolytica Positions 1231205..1232810
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1606 (nuc.)
Previous locus YALI0D09713g Next locus YALI0D09757g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09735g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09735gYALI0D09735g_mRNA-001YALI0D09735g_CDS-001

Nucleotide sequence

 

>YALI0D09735g
ATGTTCAACCTGACGGACCACAAATTCCGTGAGAGGGTGGAGGACAACGTGCGGGCCCGA
AGCGCCCTGCTGCGCAACAGCTGCTCCACCTGCTCCTACCAGTCGGTCGACAGACGGGCC
TACGGCTGGAGAAGCACCTCCTCCAAAACCCGGCTCTTCTCCAGAGACAACCTGCGCAAC
ATCAGCTACACCCGGCTGATCGGAGGCATGGCGCTCTTTGTGTCGCTCAGCTTCGCCATC
AACTACCTGCTACTCATGTCCTTTGGGGCCTCTCCTGTTCCCGGGGGACTCACCGGCGGC
TTCCGGCTCACCCCCATGGTCCCGGGCACAGCGCCACCCGGAGGAGCGCCCATTCTCACA
AACACAGCGCTCATCATCTCGCCAAATTCGGACTTTGTGGTGCCTGCCCGAATGGCCGCT
TTCGGAAGAGGACTCATGATGGACGAGTTTGAAACGACCGTTGATGAGACAGAGAAGCAA
GCCAGAGATGCCCAAGAGACAGACAAACTCGCGCACGACATTGCCGAACACTTTCCGACC
GGAATTTCAGACGGAACCCCCATCCTGATTCCCCCCAACAGACGCAAGGAGCCCACAGTC
AACGCACCTCTCAGAGGCGAGATCGAGGTGGTCGGAGGAGATGCATGTGGATCGGGTAAG
CACCGCAACCTAACAGACAAGATTGCGCTCGTCATGAGAGGAGGCTGCTCGTTCTACGAC
AAGGTGCTGACGATCCAGGGCTGGAACGCCAAGGCCGTTATTGTGGGAGACAACCAGTAC
AACCGAGGGCTGGTGACCATGTACTCCACCAACGATACTGACATGTGCCAGGTGCCAGCC
ATGTTTGTGTCTCGAGCCTCATTCGAGCTGCTGTCTACCGAAGATGAAGTGAGCATAATT
CCTGGCCCTTCGGCTACCCCAGCTCTAGACACTATTTTGTTTCTGCTCATCTCGCCCATC
TGCTCGCTCTCAATCATTTATCTCATGGTATCTGTGCATCGATACTTTACACAGCTGACT
CGACGTGCCCCCAAGCGAGCTGTTAAACAGCTTCCTGTCCGAGTCTGGATGGGCCAAGGA
GTCCATTCTCCGACTGTAAGGGGCAAAACACAAGGCAACAACTCGTCTTCGGGAGTTCTG
GAAAGTGTAGAACCCACCTCTACGGCTGCTGCTGCTCTGGAAGACTCTCCCGAGCCTCCG
TCCACACATTCCGACAAGGTATGGGTGTCGTCTGACGAGTGTATCATCTGCCTGGAGGAG
TTCACAGTGGGCGAGTCGCGGGTGATGCAGTTGCCTTGTGGGCACGATTTCCACGAGGAG
TGTATCCAGCGATGGTTGACTACGCAGCAGCGAACCTGTCCCATTTGCAAGCACGATATT
ACTCAGCCCATGAGCTCTCCCGGTGAGACCACTCCTTTGGTTTAAGATGAGTAAGAGACA
GCATAGCCGAGGATGCACCCCAGCAGGTGCTTATGACTGACACGATATATTTATTTACCC
GGTAGGGGTACAAAGTAGCTAATTGACGAAAATGGATCCAGTGGTATAGTGGTGCAACCA
ACTAGAATGACGCGATCAGACCAGAGGATGCTAATTTTGATGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09735g_CDS-001

Protein length: 475 aa.
Product: Conserved hypothetical protein

>YALI0D09735g_CDS-001 MFNLTDHKFRERVEDNVRARSALLRNSCSTCSYQSVDRRAYGWRSTSSKTRLFSRDNLRN
ISYTRLIGGMALFVSLSFAINYLLLMSFGASPVPGGLTGGFRLTPMVPGTAPPGGAPILT
NTALIISPNSDFVVPARMAAFGRGLMMDEFETTVDETEKQARDAQETDKLAHDIAEHFPT
GISDGTPILIPPNRRKEPTVNAPLRGEIEVVGGDACGSGKHRNLTDKIALVMRGGCSFYD
KVLTIQGWNAKAVIVGDNQYNRGLVTMYSTNDTDMCQVPAMFVSRASFELLSTEDEVSII
PGPSATPALDTILFLLISPICSLSIIYLMVSVHRYFTQLTRRAPKRAVKQLPVRVWMGQG
VHSPTVRGKTQGNNSSSGVLESVEPTSTAAAALEDSPEPPSTHSDKVWVSSDECIICLEE
FTVGESRVMQLPCGHDFHEECIQRWLTTQQRTCPICKHDITQPMSSPGETTPLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG