YALI0D09427g

Overview

Description weakly similar to uniprot|O74959 Schizosaccharomyces pombe Hypothetical short chain dehydrogenase
Locus type CDS
Locus tag YALI0D09427g

Location

Species Yarrowia lipolytica Positions 1203694..1204701
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1008 (nuc.)
Previous locus YALI0D09405r Next locus YALI0D09449g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09427g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09427gYALI0D09427g_mRNA-001YALI0D09427g_CDS-001

Nucleotide sequence

 

>YALI0D09427g
ATGTCCCGATCGAAATTCACCGAATACAAGCAGGCAGCCCGAAACTTCTGGGTGCCAGAA
CCGCACTTCACCGAGAAGGATTACCCCGATCTCACCGGAAAGACGTACGTTATTACTGGA
GGACACTCCGGAGTCGGTCTCGAAGCCACAAAACTGCTCATTGGCAAGGGAGCCAAGGTG
ATCATTGTGGGCCGAAACAAGGAGAAGGCTCAGGACGTGCTCAAGGAGCTGCCCGATGGC
AAGTTCGACTTCGCAGAGGCGGACCTCGCTGATCTGACCACCATCAGCACCGCAGGAGAC
TACATCACCAAGAATTATCCCGAGATCCACGGTGTGATTCTTAACGCCGGTGTCATGACC
CCTCCTTACTCCAAAACCGCCCAGGGTCATGAGTTGCAGTGGGGAACCAACGTGGTGGGC
CACCAGGCTATCATGAAGTACCTGACTCCCATCGTCATCAAGACCGCCAAGACTTCTCCT
CCTGGAACCGTGCGACTCGTGTGGGTCTCTTCGTCTGCTGTCGTCATCTCCGGACTTCCC
GGAGGTATCAACTTCGACGATATCAACTACGAGAAGGAAGAGAACCCCAGTCCACACGTT
CTGTACTCGCAGTCCAAGATTGGAAACGCCTACCAGGCGTACCTGTGGTCCAAGAACCAT
CCCGACTCGGGCGTCATTTCCGTCTCTGTGGATCCCGGCAACCTCAAGTCCAACTTGCAG
AGACACTCCAGCGAGTTCCTCAAGAAGGCCTTCAACTACGTCCTCTACCCCGCCCAGTAC
GGAGCCTACACCGAGCTCGCTGCTCTTTTGGCTCCTGATGTCCATGACGGAGAGCATCTC
ATTCCCTGGGGTGTTCCTGGCCATCTGAGATGGGATGTCGATGAGGGACGAAAGGGAGAG
AAGGGAGAACATTTGTGGAAGAAGCTTGAGGGGGATGTTAAGGACTTTGTCAAAGAGTCT
TACCCTTAAGAGTATTAGTAAAGCAATAAAAGTTGATGTTATTTGTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09427g_CDS-001

Protein length: 323 aa.
Product: Conserved hypothetical protein

>YALI0D09427g_CDS-001 MSRSKFTEYKQAARNFWVPEPHFTEKDYPDLTGKTYVITGGHSGVGLEATKLLIGKGAKV
IIVGRNKEKAQDVLKELPDGKFDFAEADLADLTTISTAGDYITKNYPEIHGVILNAGVMT
PPYSKTAQGHELQWGTNVVGHQAIMKYLTPIVIKTAKTSPPGTVRLVWVSSSAVVISGLP
GGINFDDINYEKEENPSPHVLYSQSKIGNAYQAYLWSKNHPDSGVISVSVDPGNLKSNLQ
RHSSEFLKKAFNYVLYPAQYGAYTELAALLAPDVHDGEHLIPWGVPGHLRWDVDEGRKGE
KGEHLWKKLEGDVKDFVKESYP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG