YALI0D09317g

Overview

Description weakly similar to uniprot|D5GQ44 Tuber melanosporum GSTUM_00012193001 hypothetical protein
Locus type CDS
Locus tag YALI0D09317g

Location

Species Yarrowia lipolytica Positions 1184119..1185593
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1475 (nuc.)
Previous locus YALI0D09295g Next locus YALI0D09339g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09317g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09317gYALI0D09317g_mRNA-001YALI0D09317g_CDS-001

Nucleotide sequence

 

>YALI0D09317g
ATGCCCTCAACTATTGCTCTAGGATGCACCGTCGGAATCGTCTCGTCGCTGTGTCAGTCG
GTTGGACTCACCTTACAACGCCAGAGTCACATTTTGGAGGACCACAAGCCCGGTACCGAC
TCGTATCGACCGCCTCATCGTCGAGCCCGTTGGAGAGTCGGCCTGCTGCTGTTTCTCATT
GCCAACGTGCTGGGATCGTCGGTGCAAATCACCACTCTTCCGCTGGTGGTTCTGTCGCCG
TTACAGGCCGTGGGTCTGGTGTTCAACTCCATCTGTGCCACCGTCATTCTCAATGAACCC
TTCACGGTGTTTTCGCTGGTCGGCACGGCACTGGTGTCGCTAGGAGCGCTTCTCATTGCC
GCGTTTGGCGCCATCGAAGAGCCCAACCACTCGCTCAACGAACTGCTCGTACTAATGAAA
CGAAAACCCTTTGTGCTGTGGATGGCATTCACCGCCGTGCTCGTGTTTGGCATCATGGGC
GCCATCAAGGCGGTTTCTCGATCCCAGAAACACCTCGGCTCGAAGAGAAGAGCCAGTATT
GGCAGTGGCTACAGCACAATCACGGAGGAAGACCAGAATGAAACCAGGGACTCCCCAACC
ACAGTGCTTATCGGACTTCTCTACGGAGGCATTTCTGGTATTCTCTCGGCCCATTCTCTG
CTGTTTGCAAAGTCAGGTGTTGAACTGCTTCTCAGAGCAATGACTTCCGGCCTGGGAGAT
TTACAGCGATGGCAGTCCTGGGCCATTGTGGTGTGCTTCCTGACCCTCGCTGTGACACAG
CTCATGTTCCTCAACAAGGGTTTGCGACTGTGTTCCACGTCGATTCTTTACCCGCTCGTG
TTTTGCGTCTACAACATCATCACCATCGTCAACGGCCTCGTCTACTTCCAGCAGCTCGAG
CGACTATCGAGTGTGCAGATCATCCTCGTCATTCTGGGCGCGCTGCTCGTGTTTGCGGGA
GTTGTGGCTTTATCGTGGCGTTTCCAGGAAAAGTCTTCTCTTTCTCATGTCTATGAAGAC
GAGGAGATTGAGCCACTGATGCCAGCTGCTCTGATTGCGCTGGAAAACACCATGGAAGAG
GCGGAAAACGAGAGCGAGAGAGATACGTCTCCTTCTCCGCTGTATTCGCAAAATACTAAC
AATAACAGTGGTCGACGAAAGCGATGGTCTCTGTCAATCTCCACCACTCCTAACAATGCC
AGTTCAGCCTCGATAGCTGGACCCCCGTCTCCCTCACCGTTGCGTCTGCACCGGCGATCC
ATGTCGTCGCTCTCGTATCTGCCCCAGAGCCCCAGCAACCGGCGCAAGATCTCCGTTCAG
CAGCAGACCCTCATGAAGGAGCTGGGACTGTGAACACACACTACTAACGCTTTGCCTTCA
TATTATTTAATACATAGACTAGAATTCATGGACCCAGTGTGTAATTGTAGCAGGGTGGTC
AATTAATCTGCTGGGATAAAGCTGGTCTTGAAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09317g_CDS-001

Protein length: 451 aa.
Product: Conserved hypothetical protein

>YALI0D09317g_CDS-001 MPSTIALGCTVGIVSSLCQSVGLTLQRQSHILEDHKPGTDSYRPPHRRARWRVGLLLFLI
ANVLGSSVQITTLPLVVLSPLQAVGLVFNSICATVILNEPFTVFSLVGTALVSLGALLIA
AFGAIEEPNHSLNELLVLMKRKPFVLWMAFTAVLVFGIMGAIKAVSRSQKHLGSKRRASI
GSGYSTITEEDQNETRDSPTTVLIGLLYGGISGILSAHSLLFAKSGVELLLRAMTSGLGD
LQRWQSWAIVVCFLTLAVTQLMFLNKGLRLCSTSILYPLVFCVYNIITIVNGLVYFQQLE
RLSSVQIILVILGALLVFAGVVALSWRFQEKSSLSHVYEDEEIEPLMPAALIALENTMEE
AENESERDTSPSPLYSQNTNNNSGRRKRWSLSISTTPNNASSASIAGPPSPSPLRLHRRS
MSSLSYLPQSPSNRRKISVQQQTLMKELGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG