YALI0D09295g

Overview

Description weakly similar to uniprot|Q03770 Saccharomyces cerevisiae YDR160w transcriptional regulator SSY1 of several transporter genes
Locus type CDS
Locus tag YALI0D09295g

Location

Species Yarrowia lipolytica Positions 1180736..1182945
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2210 (nuc.)
Previous locus YALI0D09273g Next locus YALI0D09317g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09295g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09295gYALI0D09295g_mRNA-001YALI0D09295g_CDS-001

Nucleotide sequence

 

>YALI0D09295g
ATGAGCATATTCCCAAGCTACTACCAGGACTCGAGCGTGAGTTTCGAGACGACAGGAGTG
GAGCTAGAGCTGTTTGACGACGCAGCTTCGGAAGGATGCATCGACGAACAGGACAACCCG
CATCTGGAACGGCTGGCGGAAAGGTATCTCGACAATTACGAAGATGGCGAGCTGGAAAAC
GAAGGGTTTCGCACCGATCTGGAAGAACTCAACTTCCAAACGGCAAGACGGATCCTCAAC
CAACAACAACTGGAGATCCATAAACGAATGGTGGACGAAGGAGACAATGATACAATCAAC
ATTGACGACATCCACCAAGGAGATGACGACATGCCCTACACAACCCAGAGGAGACTCCTA
CCTCGACATTTACACATGCTAGCATTGGGAGGACCGCTGGGAGCAGGTCTACTGCTGTCT
GCAGGACGAAGTATCACCACTGCTGGTCCCCTGGGCGCAATTCTGGGCTTCATGTTGACT
GGTCTCATAACTTTTGCCTGTATCAAGAGTATTGGAGATATGGTCACCCTGTATCCTTCT
CAAGGACTGCCTCTTTTGGCAGACCGGTTTCTCAACACCTCTTTGGGCATCACTGCAGGC
GTGCTATATTGGCTGCTATTCGCTGTGGCTATCCCGTCTGAGCTGTCTGCTGCCGCGGCT
CTGTTGGAGGTGTATCCGAGTATGAGTCAGCCCAGTTCTGCTCTGGTGGCTTGGCTGACG
CTCTTCATTCTCGTCATTGTGTTTGCCAACCTGCTTTCGGTGGACTACTACGGCGAGCTG
CTCTACTGGTGCAACCTGGGCAATCTTCTCATCGTCATTGGCATGATAATCACCATGTTT
GTGGTGTGTCCTGGAACACGGTTTTGGAAAACTTCCGAGGGATACGGAGCGTTTAGACCC
TACTACGACTCGTATGCAGGGTTCCAACTGCCGCTCAAGGGTGAACATCACGATAACCAG
ATTCATGGAGCCTCGGGGCGGTTTCTGCAGATTTATGCCAGCATGACCCTTTCGGTCTTT
GCATTTGTTGGCTCGGAAAGTGTCTTTGTAGCTGCTCCGGAGGTGAAGAACCCCCGAAAG
GCGGTGCCCTCCGCCATGAGACGTATTGCAGTCCGAATTGGACTGTGCTACATGCTTGGA
GTCATCAGTCTGGGGCTAGCTGTGCCCCCCTTCAACACTCTGGGTATCGAACGAGAAGGC
TACGGAACAGGCAACCTCAGCCATGGAGTTGTTCCCGTAGACAACACTGGTGTCTACAAG
AGAAGTCTCGTGGATCTCAACATTAGGGAGATCGGAACAGGTTCAAAAGGTTCGGATATT
GCTCCCTTACTGAAGATCCATCACGGTCACGAAAAGGCCACTCCGGCCAATGAACAGGCT
CCAGACAATATTCCCGACCGACCGAGCCCCAAACCACACCGAAATTCCACCTCGACCCCA
AACCAGATTCTGAACCCCACCTTCAATTCTCCGTGGGTGGTGGCGCTGTCTCTGGCAGGT
TATGAGACAGCGGCTCTGGCTGTGAACGGTATCTTTGTCATCTGTGCAGTGGTAGCGTCT
GCCTCCCACCTTTACTCGGCCAGTAGAACTCTCTATGCCGTTTCTACTCGATGGGAGCGT
CTGCGCTGGTTTTCTACATGCACGGCTCTTGGAATTCCATGGGTTGCAGTTCTCTTTTCT
GCCCTCATTTCTCTGCTGTCCTATTTGGTTGTGGGCTACTCTACCCGCCATGTTTTCGAC
TGGATGCTCCATTGGATCTGTACCGTGGGTCTCATTTTGTGGATCATCATGACAGCAGCG
TTTCTGCGATTCCACAAATGTCTCAAGGTGCGAAGAGTGCCCTTCAAGTACTCGTTTCCT
CAACCGTACACTGCGTGGTTTGGAATGATTGGCTGCTGTCTCCTACTGTGTTTCACCATC
TTCTCGGTGTACATTTCGTGGGACAGACGTCTATTTGCGTCCAATTACTCGGGCATTTTT
CTGACCATTGCCATCTATCTGGTTGCTCGAATCTGTACTCGAGACGATCGGTTCATTCGA
GTTTCAGAAATGGACATTTATTCAGGCAAGCGTCAGATGGATCTCCAGGTGTGGGACGAT
GATCGAGTCTACAACAGTTGGCAGAACAAGATGAAGCGGAGGATTATGGAGTGGTTTTGA
TGGACGGAAAGGGCCGTTTTATTTATTCAATTTATTTATTTCTGCACAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09295g_CDS-001

Protein length: 720 aa.
Product: Conserved hypothetical protein

>YALI0D09295g_CDS-001 MSIFPSYYQDSSVSFETTGVELELFDDAASEGCIDEQDNPHLERLAERYLDNYEDGELEN
EGFRTDLEELNFQTARRILNQQQLEIHKRMVDEGDNDTINIDDIHQGDDDMPYTTQRRLL
PRHLHMLALGGPLGAGLLLSAGRSITTAGPLGAILGFMLTGLITFACIKSIGDMVTLYPS
QGLPLLADRFLNTSLGITAGVLYWLLFAVAIPSELSAAAALLEVYPSMSQPSSALVAWLT
LFILVIVFANLLSVDYYGELLYWCNLGNLLIVIGMIITMFVVCPGTRFWKTSEGYGAFRP
YYDSYAGFQLPLKGEHHDNQIHGASGRFLQIYASMTLSVFAFVGSESVFVAAPEVKNPRK
AVPSAMRRIAVRIGLCYMLGVISLGLAVPPFNTLGIEREGYGTGNLSHGVVPVDNTGVYK
RSLVDLNIREIGTGSKGSDIAPLLKIHHGHEKATPANEQAPDNIPDRPSPKPHRNSTSTP
NQILNPTFNSPWVVALSLAGYETAALAVNGIFVICAVVASASHLYSASRTLYAVSTRWER
LRWFSTCTALGIPWVAVLFSALISLLSYLVVGYSTRHVFDWMLHWICTVGLILWIIMTAA
FLRFHKCLKVRRVPFKYSFPQPYTAWFGMIGCCLLLCFTIFSVYISWDRRLFASNYSGIF
LTIAIYLVARICTRDDRFIRVSEMDIYSGKRQMDLQVWDDDRVYNSWQNKMKRRIMEWF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG