YALI0D08646g

Overview

Description weakly similar to uniprot|Q5B3T1 Aspergillus nidulans hypothetical protein AN4799.2
Locus type CDS
Locus tag YALI0D08646g

Location

Species Yarrowia lipolytica Positions 1110580..1112757
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2178 (nuc.)
Previous locus YALI0D08635g Next locus YALI0D08668g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08646g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08646gYALI0D08646g_mRNA-001YALI0D08646g_CDS-001

Nucleotide sequence

 

>YALI0D08646g
GGAACCCGACCATTTACTCTAGAACGACATCTTAAGAAGCAAGACTCATCAAACACACAC
ACGAACGCTCCCCACAGACCCTTTTTCCACAAAACAGTGAGTATCGATTGAATACAACGA
ACATTCGCCACCGGCGGACAAGATGGTGTTGTTTGACTGTCGAACAAAATGTTGGGTCAC
AGCACCGCCCATTCCCCCCTTCTTACTTACATCTTGAGCTACGGTAGTCTCTGAGCATCG
GATACTATCGTTTTGACATTTCTCTCGTTATGCTAGTTCATTTTGGTTCTCTATTATTCA
TTTTGTCTTTGCCAAATGCTTTCCTTTTTTTCTTCATCTCATACGCAAAATGCAGTGACG
TTTGGTGACTTACGGTGACATTCTTTTAGTGACATCGCATCCTCACCACTCGGCCCCTCC
AGGAGATACCCTCGTATCATATCCACCGTCAAACGTGGTTTTTGATCGACTCTCGCATTC
ACCCCGCTGTCACCGGGCCTACCTCTGTCAGCCACACTAACTGCACTTTTGTATGCATTC
TTTTTTCTTTGTTTAGTTTCCGCATGTCGTCTATATGTTGCCTTCGGTGATACCAGAGCT
GTTTCCTCTGTCTGATACGCAAACCCGACTTACTCTTTGACGTCACAACCTAGCTCACTC
ACCCCAGGGCGCCTTGGTTCTGCCAGCGCCCTGGTTCCGCCTGCGTCCTGGTTCTGCCAG
CGCCATGGCCTCAGCCTTTTTCTCTCGCCATGAATCGTCTTTTTCTTTTCTTTCTTTAGC
CGAACTCTTACTGACAAAAGCTCCCATGTCCGAAGAACGAGTCGACGTAGAACTCGACGA
TAACGGGTTTGGACTGGATGTCAGCAGACCTACCCGAAGGTCAAACTCTGCCAACTCTGC
TGGCGAATCGTCGTCGGAGGGCTCGTCTGGCGCCAATTCCCTCAAGTCAGTTGGCTCGGA
GAACTCATCCGGCAACGGAGGCAACTCCTCGGGTAACTCCTCGGGTAACTCCTCGGGTAA
CTCTTCCGGTAACTCAGGCAGCTCCGGCACTCTTTCGGGGTCCTCGTCGTCGATGTTTTC
CAACGGCAATGTGTCGAGTGGGTGGACAGACGACAGCGCCGAAAAGCCCGATCTTGCTCC
GCGGTCGGTAGCTTCCGTTCCGGCCCAAGCCAAGCCCACCAAGTCGAAACTGTCGATGGA
ATCCCTCGATTCACTCGAATCCAACTGTCTGTACATCTTGAACCTCGATTGGTGGACAAA
TGAGGAGATTGTGCGTGGGTGGGCCGTGGACTGTGGGTTTGAGGACTCCGTGGAGACCGT
GGTTTTTGACGAACACAAGCCCAACGGCAAGTCCAAGGGAGTGGTTTACATGCAATTTGC
GTCTCTGGCCGCAGCTAGAGCCGTGAAACAGCACGTTGAACAGCTCTCGCCACGCACACA
GTCCCCCGGCTCGCAATCCGAGGACGTCGCCTACATTGTATCGTATGCACAGCCCACGTC
AACGCCATTCCAGCAGTCTCAGGGCTCTCGCTACCGCGAGAACATCAACAACAATCCTAG
CATTCGAAGCCGCTATGTGAGTTTGGTCAAGGCCGGCACCAACAAGAAGCCCAGCAGCGA
CCGAGGTCGCAGACGCAACCCCAACCAGACTCTCAACAACGGCCCCAACCACAAGAATGG
ATACCGAAACAACAGACACAATAGCGGCGGCAACAGCAGCGGCAATAGCGGCAATTACAA
CAACAATAATTACAACAATAATCACTACGACCGAGGCCGCCCTTACCGCAGCAACGGTAA
CGGCATGAGTCATGGACATAACACTCCATCCAACGCCATGAACATGAATAACATGAGCAT
GAACGGCATGACCAACATGACCAACATGACTAACATGACCAACATGACTTCAATGGACAT
GAACAACATGAACATGAACATGAACATGGCAATGATGGGGATGATGCCCATGAACTGGGG
CATGTACTATCCCAACTCCGGGATGTTGCCAGCTGGTGACAAGCCCGCTGCAGGCCCTCC
TGCCATGCCTCAGTATTCTCCACCTCCGAAGTCTCAGTACGGAGACGGCAACGGTAACGC
CTACAAAAGGGTCCGACCCAACTAAATCTAGTTGGCAGGACTTGAGTATTTATTTTATAT
GCAACACGTGAAACAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08646g_CDS-001

Protein length: 440 aa.
Product: Conserved hypothetical protein

>YALI0D08646g_CDS-001 MSEERVDVELDDNGFGLDVSRPTRRSNSANSAGESSSEGSSGANSLKSVGSENSSGNGGN
SSGNSSGNSSGNSSGNSGSSGTLSGSSSSMFSNGNVSSGWTDDSAEKPDLAPRSVASVPA
QAKPTKSKLSMESLDSLESNCLYILNLDWWTNEEIVRGWAVDCGFEDSVETVVFDEHKPN
GKSKGVVYMQFASLAAARAVKQHVEQLSPRTQSPGSQSEDVAYIVSYAQPTSTPFQQSQG
SRYRENINNNPSIRSRYVSLVKAGTNKKPSSDRGRRRNPNQTLNNGPNHKNGYRNNRHNS
GGNSSGNSGNYNNNNYNNNHYDRGRPYRSNGNGMSHGHNTPSNAMNMNNMSMNGMTNMTN
MTNMTNMTSMDMNNMNMNMNMAMMGMMPMNWGMYYPNSGMLPAGDKPAAGPPAMPQYSPP
PKSQYGDGNGNAYKRVRPN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG