YALI0D08602g

Overview

Description some similarities with uniprot|Q08023 Saccharomyces cerevisiae YLR077w
Locus type CDS
Locus tag YALI0D08602g

Location

Species Yarrowia lipolytica Positions 1104045..1106112
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2068 (nuc.)
Previous locus YALI0D08580g Next locus YALI0D08624g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08602g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08602gYALI0D08602g_mRNA-001YALI0D08602g_CDS-001

Nucleotide sequence

 

>YALI0D08602g
ATGAAACACTACAGAGCTGTACCTGGCGCTCTGAGGGCGTCGCTGGCCAGATCCGCCGCG
CCCAGATCGACCTCCACCCGGTTTCTGTCGACTTCCGTGCTCAGAATGGCCGAGCACAAG
AACGAGTCCAAGGGCAAACCTCTATCGTACCCCCCTCCGCCTCCCACAGTTCAGATTCCG
CGGTTTGACGGAACGCCCAATTACAATCCCTCCGAGGAGGAGAAGCAGCAAGCCAAGCAC
GAGAAGGCCGTTTCCTGGGCCATCATTTCTGTGGCCTCGGTAGTTGGCGTCTACTTCGGC
TACAAGTGGTATGGGCCGTACTCTGAGTCCGACGAGGAACTCCATCGACAGGTGGCGGAG
CGACAGCAGAAGAAGAAGGCTGTTGCCAGTGCCGCTGTTCGACAGGAAGACGCCGACGCC
GTTGCTGCTGCTGCGGCGGCGGCTGACAAGTCCTCAAAGAAGGGCAAGGCTTCGGTTGCT
GGAGTCTCCTTTGCTGAAATGACTCCCGGACTCTTTGCCTGGGGAGATAACGATGGACAC
GCAATCAAGGACACGTACAACGCCGAATCCGAGACCCCCAAGCTGGTGCGATCTCCCGTT
CGACTGCGATACTTTGAAGGAAAGTTGCTGCGAGACGTGACTCTGGGCGATGGCTCTGGA
GCTGCCATTCTGGACAACGGAGACGTGGTCCAGTGGGGTGACCGGTTTGCCCCACACTCC
GTCAAGAATCCCGAGGTCACTCTGCAAGGAAAGGACGCCGTCAGAATCGTCCAGTCTCGA
AACATGCTCTATGCTCTGTCCAAGGATGGAACCGTGTACTCGTTCCCTGTTAGCAAGGAG
CTGCAGGTGGCTGGACCCAAGGAAAGAGAAACCCGAACGCGTCTGATCCCCGGATGGAAG
CGAGAAGCCAAGATCACCTACCGTCAGCTGGACTTTGATACCACTCTGGGCATCACCGAG
AAGCTCAGTGACATTTCTGCTGGACAAGACCATCTTCTGGCTCTGTCCAACAAGGGCCGA
GTGTTTGTTTCATCTACCGGAGGAGCCATTGAGGAGGTTGAGACCGATCCTAACCCCGTG
ACTGGCGAGTTTTCAGAGACTCTGGTTGGTACCGAGGCTCCCCTTCCCTCCGCTGGCCAG
TTTGGAATTGCAAAGTTCTCTCACTTCAACACCGCTCCCCGACCCGGAACTCTGTACGAG
ATTCGATCTTTCCGAAATGCTGTTGTCACTAACATTGCTGCTGGTGCCTTCCATTCGCTT
GTGCGAGACCAGAACGGTAACATGTGGGTGTTTGGCTCCAACAAGTGCGGCCAGCTTGGT
CTGGACTACGCCTATGAGTCGCAGAACGTTGCTCTGCCTCGTCAGCTGACCCTGGGCCGA
ATTTGCAAGAAGGACCAGGCTGCTATTGTTACCCGAGTCTTTGCTGGAGGAGATACCTCG
TTTGCCGGCATCAAGGTGGTGCAGTCTGATGATTACAACTCCGCCTCCAACTCGGAGCGA
AAGAAGCTGTTGCAGGACACCGCCGAGGTGATTTACTCGTTCGGTGACGGTCTCAAGGGC
CAGCTTGGAAACGCCACGTTCAAGCATGTGCAGGCTGAGATGACGCCCATCAAGGAGATC
AACTATGCCTCTGAGTGGAGCGAGAAGCTCAACAAGGTTGTTCCCATCCAGGTAAACTAC
ATGTCCACGGGCCCCAACCACGTGGCTGCCGTTCTGGACAACTCCAACGACGTTGCCACT
ACCCAGGACCTGTACCTGTGGGGCGGCAACGAGTTCTCGCAGATTGGAAACGGCAAGCGA
AACAACATCCCCAAACCCTCGCATTTGATCACCAAGCACACCACCGAGTCCGATCCCTAC
ACCCAGCTCATGACCAAGACCAAGATCAACGGTTGCGAGGTCCAGCAGCAGATTGTCGCT
GGCGACGGAACCACTTGTGTCTTCTACAAGCGAATGTAAGGAGGGGTGTGGAGTGTAGCA
AGCAGATGTAAATAGTATAAGATAGGTATGATAGGAAAGGTGTAAAACAGGCAAAATGTT
GGTACGTCAACCCGATTATAATTCAACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08602g_CDS-001

Protein length: 653 aa.
Product: Conserved hypothetical protein

>YALI0D08602g_CDS-001 MKHYRAVPGALRASLARSAAPRSTSTRFLSTSVLRMAEHKNESKGKPLSYPPPPPTVQIP
RFDGTPNYNPSEEEKQQAKHEKAVSWAIISVASVVGVYFGYKWYGPYSESDEELHRQVAE
RQQKKKAVASAAVRQEDADAVAAAAAAADKSSKKGKASVAGVSFAEMTPGLFAWGDNDGH
AIKDTYNAESETPKLVRSPVRLRYFEGKLLRDVTLGDGSGAAILDNGDVVQWGDRFAPHS
VKNPEVTLQGKDAVRIVQSRNMLYALSKDGTVYSFPVSKELQVAGPKERETRTRLIPGWK
REAKITYRQLDFDTTLGITEKLSDISAGQDHLLALSNKGRVFVSSTGGAIEEVETDPNPV
TGEFSETLVGTEAPLPSAGQFGIAKFSHFNTAPRPGTLYEIRSFRNAVVTNIAAGAFHSL
VRDQNGNMWVFGSNKCGQLGLDYAYESQNVALPRQLTLGRICKKDQAAIVTRVFAGGDTS
FAGIKVVQSDDYNSASNSERKKLLQDTAEVIYSFGDGLKGQLGNATFKHVQAEMTPIKEI
NYASEWSEKLNKVVPIQVNYMSTGPNHVAAVLDNSNDVATTQDLYLWGGNEFSQIGNGKR
NNIPKPSHLITKHTTESDPYTQLMTKTKINGCEVQQQIVAGDGTTCVFYKRM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG