YALI0D08316g

Overview

Description similar to uniprot|C5MDW7 Candida tropicalis hypothetical protein CTRG_03869
Locus type CDS
Locus tag YALI0D08316g

Location

Species Yarrowia lipolytica Positions 1065321..1066538
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1218 (nuc.)
Previous locus YALI0D08294g Next locus YALI0D08338g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08316g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08316gYALI0D08316g_mRNA-001YALI0D08316g_CDS-001

Nucleotide sequence

 

>YALI0D08316g
ATGATGTTCGACACCTTCTCCCCCATCACCCCACCCAGCGAGGCTGCACCCAACGCCGTC
CTGGCCTCGGCACAAACCGTTCTTCGAGCACAGGCTGCCACTATAGCCCACATCACCGAC
CTCTACGATACAGACCCCGAGGTGCAACAGCAGTTCGCCAAGGGCATCCAATACCTGCAC
AATGCCGTGGTGGGCGGAAACAAGGTAGTCCTGACGGGAATGGGCAAGAGCCACAAGATC
GCATGCAAGCTCTCGGCCACCATGAACTCGTTGGGCATGCATGCCACTCCCTTGCACCCT
ACAGAGGCCCTTCATGGTGACCTGGGCATTGTCAAGCCCGGAGACGTGGTGGTGATGATC
ACCGCCTCAGGAAACACCCCCGAGCTCAAACAGCTACTGCCGCACCTCGACGCTACACTG
CTGACTCTCACCTGTGAGCCCAACTCGTCTCTAGGCCACCTGTCACATGCCGTCTTCGCC
TGTCCCGTTCCGGATTCCCACAAGGAAAAGAACATTTACGGAATGGCCGCACCCACAACT
TCGACTACGGCATGTCTTGTGGTCGGAGACTCCATTTGCATCGCTCTTTGTGAGTCTCTC
CAGCTGGACAAGGCCGAGCGAAACCGAACCTTTGGCCGTAACCACCCCGGAGGAGTTATT
GGAGAGGCTTTCAAAAACGAGCTCCCTCCCGTGCAGTCCGTCTGCTCCTACTCCACCAGC
TCACACAACGAAATGTTACTGCTGAGAACCACCAGCGGCAACCAGTGGGTCGTGGTCGAC
AACACCTGGCTCGTGCCTACCCGCAACATTCTGGGATTGATTGATGCAGGTTTCACAGAC
CAGATGGAAACGCAGATCCGGCTCGAAGAGCTCGAAAAGGTGGACCAGAGCCGTCTGGCA
GGAGTCCCTCCCGGTCAGCGGGTCGTGGTAGTCAAGGAGGACGAAATCGTTGGTGTTTAC
GAGAGGTAATGAAGAGATCACCGATTTCAAAACTAATGACATCTTATTTCGTGACACTCT
CAACCCACACTGATAGGCTACAGTGTGGTCTCACCTCACACCCCAACTACAGTGCGGTGT
GAACAACCTGACTTGTCCTAACAAGACACTACAGACTCAGCATGAACTTATAGCTCCAGT
TCATAGACCATAGAGGACTCAGTCCAGCGCCAGCGCACACTCCACTAACCCATAGATAAT
GATTAACGTTTGTATACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08316g_CDS-001

Protein length: 323 aa.
Product: Conserved hypothetical protein

>YALI0D08316g_CDS-001 MMFDTFSPITPPSEAAPNAVLASAQTVLRAQAATIAHITDLYDTDPEVQQQFAKGIQYLH
NAVVGGNKVVLTGMGKSHKIACKLSATMNSLGMHATPLHPTEALHGDLGIVKPGDVVVMI
TASGNTPELKQLLPHLDATLLTLTCEPNSSLGHLSHAVFACPVPDSHKEKNIYGMAAPTT
STTACLVVGDSICIALCESLQLDKAERNRTFGRNHPGGVIGEAFKNELPPVQSVCSYSTS
SHNEMLLLRTTSGNQWVVVDNTWLVPTRNILGLIDAGFTDQMETQIRLEELEKVDQSRLA
GVPPGQRVVVVKEDEIVGVYER*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG