YALI0D07480g

Overview

Description similar to uniprot|P38248 Saccharomyces cerevisiae YBR078W (ohnolog of YDR055W) ECM33 GPI-anchored protein of unknown function
Locus type CDS
Locus tag YALI0D07480g

Location

Species Yarrowia lipolytica Positions 954982..956401
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1420 (nuc.)
Previous locus YALI0D07458g Next locus YALI0D07502g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07480g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07480gYALI0D07480g_mRNA-001YALI0D07480g_CDS-001

Nucleotide sequence

 

>YALI0D07480g
ATGCAGTTTTCCCACGCTCTTCTGGCCGCCCTCGTGGCTCTGGCCTCTGCCCAGTCCTCC
GCCACCACCTCTGCATCCTCCTCTCAGCAGTCCGGCTGCTCTCAGGACATCAAGGTCCAG
TCCCAGTCGGACCTCGACAAGATTGCTGGTTGCAAGAAGCTCGATGGTTCCATCGAAATC
ACCGGTGAGGCCGGCGTGCTCTCCATTGACGGAATCGAGGAGATCACCGGCTCCCTCAAG
GCCAACAACCTGTCTACCCTCAACTCACTGACCGCCCCCAAGCTGACCTCCGTCGGCAAG
GACCTCGACCTCCAGGTGCTTAACGGTCTGTCCACCCTCTCCTTCCCCGCCCTCCAGGCC
GTCGGAAACCTCAAGTGGATCACCCTGCCCAACCTCGACGTTATGCAGCTCAACCAGGGT
GTCAACAACGCCACCTCTGTCGTCATTTCCGACACCTCCATCAAGGAGCTCATGGGCATC
AACGTCGTCGACGTCGGTGAGGTCAACATCAACAACAACCGATACCTCAAGCAGATTGCC
CTCGGACTCCAGCACGTGACCGAGTCGCTCCAGATCTCCGACAACGCCCCCGGCCTCGAG
GCCCAGTTTGACAGCTTGCAGTGGGCCGCCAACATCTCTTTCCGAGGTGTCTCTAAGGCC
GACATGCCCAACCTGACCTACGTCAACAACTCCATCGGCTACGTCAACAACACCATCAAG
AACATCTCTCTGCCCCAGCTCACCAAGGTTGGCGGTGGTATCTTCTTTGTGTCCAACTCT
GAGCTCACCGACCTCAAGGTCCCCGAGCTCGAGGAGATTGGCGGTGGTCTCCAGGTCGCC
AACAACACCAAGCTCCGAAAGGTCGACGGTTTCCCCAAGGTCAAGTCCGTCGCTGGTGCC
ATTGAGATGCTTGGTAACTTCTCCGAGGCCACCCTCCCCAAGCTCAACCAGGTCAAGGGC
GGTGTTGACGTTGAGTCCAACGACTCCGGCTTCAACTGTTCTTCTTGGAACGACGCCCAC
TCCAACGGTGACATCCAGGGAGACTCCTACCAGTGCTCCGCCAAGGAGTCCCAGACCTCC
GTTGCCCTCTCCGCCACCTCCGGTTCTGGTTCCGCCTCTTCTTCCGCCACCGGCTCTGCT
GGCTCCTCTGGCTCCGCCGGCACCTCTGCCGGTTCTTCTGCTCAGGCCTCCGGCTCTTCC
GCCAAGAAGGACGGCGACAAGAAGAACTCCGCCAACACTCTGCGAGGCGCCGAGATCGTC
GCTGGCTTCGGTGCTGGTGCCGCCATCCTCATCCACTTGCTCTAAGCGCAATATTTATTC
CTCAGAGAGGTGTTTCTTTCTACATGTGTACATCCCTAATATATTAATTAAAGTACATAC
ACTGGCAGGTATCCCAAAATATGATAAAACGAAGAGAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07480g_CDS-001

Protein length: 435 aa.
Product: Conserved hypothetical protein

>YALI0D07480g_CDS-001 MQFSHALLAALVALASAQSSATTSASSSQQSGCSQDIKVQSQSDLDKIAGCKKLDGSIEI
TGEAGVLSIDGIEEITGSLKANNLSTLNSLTAPKLTSVGKDLDLQVLNGLSTLSFPALQA
VGNLKWITLPNLDVMQLNQGVNNATSVVISDTSIKELMGINVVDVGEVNINNNRYLKQIA
LGLQHVTESLQISDNAPGLEAQFDSLQWAANISFRGVSKADMPNLTYVNNSIGYVNNTIK
NISLPQLTKVGGGIFFVSNSELTDLKVPELEEIGGGLQVANNTKLRKVDGFPKVKSVAGA
IEMLGNFSEATLPKLNQVKGGVDVESNDSGFNCSSWNDAHSNGDIQGDSYQCSAKESQTS
VALSATSGSGSASSSATGSAGSSGSAGTSAGSSAQASGSSAKKDGDKKNSANTLRGAEIV
AGFGAGAAILIHLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG