YALI0D07458g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D07458g

Location

Species Yarrowia lipolytica Positions 951891..953247
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1357 (nuc.)
Previous locus YALI0D07436g Next locus YALI0D07480g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07458g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07458gYALI0D07458g_mRNA-001YALI0D07458g_CDS-001

Nucleotide sequence

 

>YALI0D07458g
ATGGCCGAAAACGCCTCGAAACACACTCACAACAAAGATAACCCGCCCGCAAATCCGACC
ATGGCCTCAGAAGTTGCCATTCCCGTCCCCGACGCCGCCCAGCTGGTCCACCAAATTTTG
TTGCAGATCCGCGCAGCGATCCTGGAATATCAGAACCTCGAGGCTCTAGGAGACCGGTAT
GAAGACAAGATCGAGGTGGTGACCAAACCCAAGTCCGACCTGCTGTTTCTTTTGGCTCCA
CTGGTGCGAACCAAACTATCCTTTGGTGCCTCTTCAGGCGCCTCTTCCAAACGATCTTCT
TTTCTGTGCGACAATGGAGACGTGCCAGGTGACTACATCGACAGCTACCCACCGTGGCTG
GACGACCTGACATGGGGCGTGTCATCCGAGAACCCAGAAACTGACATCATCACCCAAGTG
GTGCGTGTGGCAAGACAGTTCCGGTTCTCACTGGTGCAACATGGATTTGTGAGACTCGAC
CCCGAGAGTCTATATGCCAGATGTCTTGTTCAGAACCTGGGAAACAAGGAGCAGATTGAA
ATCCGATTTGTGTGGGTCCCCGAAGAGAAGAAATGGCTCTTGCATGACTTCCTTCTTGCG
CCCCAGGGTGGAGAACGAACCATGGGATACGACTCGGTCTCTGAGGCCGAGGAACGGTTC
TCGACGTCTCAATCTGTGCCCTCGCCGCCGCAGAGCACGCATACAAAGGCAGAGCAAACC
ACAAAGAGTCCTAACGCCTCTTCCAGCTCAGATGACGATTACTGGAATATGTATGGCCAG
GAGGAGGAAGAGGAGGACGACGAGGGAAAAGGCGCCATTGTAGACGCTATGGACATTGAC
GACATTAATGCATTTGCGGATCAGACAACTATCAAGGGGGTGGCCATTCCAAAACTGGAC
ACTGACAACAAAACTGTCACCGGTGATGACGGAGGGGAAGACGATTACTATGCAGCTTAC
GACAAGGTGGAGACAGCGGTTGGTGGCGACGAGCCCGTGATTAAAGATACCCCCACCGAG
GCTCATGTGGTTGAGTCGATTCGGTCGCTCAAAAGACTCTGTGAAGGCTCTGGCATTTCG
CAGAGCAGATTTGCCGAGCTTGTCAAAAGAGGACTCACGGAAGATTGACTATCTAGCTGG
GAGATGGAGAACGGTCGATGGAAAAAAGTTGCATAGACACTCGCTGAGCAAAAATATTAT
AGATGGACAGTATGTACAATCAATGGCGTCTTAATGGGGTGTCAGAGTGTGTATTGAGTG
TTGGAGGAGAAAGATCATCTGGACAGACTCGGAGAAAGTTTCTAGAATCACATTACAGGT
GTATGTACGATATATACGTAAAACATAGAGTGGAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07458g_CDS-001

Protein length: 376 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D07458g_CDS-001 MAENASKHTHNKDNPPANPTMASEVAIPVPDAAQLVHQILLQIRAAILEYQNLEALGDRY
EDKIEVVTKPKSDLLFLLAPLVRTKLSFGASSGASSKRSSFLCDNGDVPGDYIDSYPPWL
DDLTWGVSSENPETDIITQVVRVARQFRFSLVQHGFVRLDPESLYARCLVQNLGNKEQIE
IRFVWVPEEKKWLLHDFLLAPQGGERTMGYDSVSEAEERFSTSQSVPSPPQSTHTKAEQT
TKSPNASSSSDDDYWNMYGQEEEEEDDEGKGAIVDAMDIDDINAFADQTTIKGVAIPKLD
TDNKTVTGDDGGEDDYYAAYDKVETAVGGDEPVIKDTPTEAHVVESIRSLKRLCEGSGIS
QSRFAELVKRGLTED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG