YALI0D05995g - SAC1

Overview

Description uniprot|Q6CA45 Yarrowia lipolytica YALI0D05995g SAC1 Phosphatidylinositol phosphate (PtdInsP) phosphatase, putative
Locus type CDS
Gene name SAC1
Locus tag YALI0D05995g

Location

Species Yarrowia lipolytica Positions 766257..768145
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1889 (nuc.)
Previous locus YALI0D05973t Next locus YALI0D06017g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05995g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05995gYALI0D05995g_mRNA-001YALI0D05995g_CDS-001

Nucleotide sequence

 

>YALI0D05995g
ATGAAATACGCAGAGGACCACAACGGCTACTACTTCCAACTGCCCGGCGAAAAGACGTCG
CTGACGATTGCCAAGGGCTCGGGAGCGATTGCGGCCAACGAGGGCGTGGTGGCGCCGGGG
GGCAAGGAAATTGCCGCAATCGTGGGCACCATCCGGCTGCTGGCGTCGCAGTACATCATT
GTGGCATCCAAAACGGAGACGGTGGGTGCGATTTTCGGCCAGCAGGTCCACCGGGTCACG
GCGTTCGACATTCTGCCCATCAATGGCGGCTCGGCAGACCCCCAGGAGCAGCAGTACCTC
AAGATTCTGCAGTTCCACCTCGACAGCTCGCGACTGTACTTCTGCCGAACCTGGGACCTC
ACCACGTCACTGCAGGCCCAGAGCCACGCCCAGCGGGCCCCCGGAGTGTCGTTCGAGACC
GCTGACGAACGGTTCTTCTGGAACAAGTACGTGTGCACCGATCTGATTGACGCCGCCCGT
ACCCAGCCCGGCGTGGCGCTGTTCGTCACCCCCATGTCCTTTGGCTTTGTGGAGCTCTCC
CAGAGCACCATCAATGGCCGAAGCATCACCTTTGGTGTCATCACCCGACGATCGCGACAC
AGAGCCGGCACCCGGTACTTCCGACGAGGAATTGACGCCCACGGCAACGTGGCAAACTTC
AACGAGACCGAGCAGCTGCTCATCGTCGAAGGCACCGCCGAGCCCCCACGTGTCTTCTCC
TACCTGCAGACCCGAGGCTCCGTCCCCGTGTACTGGGGCGAGGTCATCAACCTCAAGTAC
AAGCCCAACCTGCAGATTGGCCAGCCCGCCACGGACGCCGCCAAGCTGCACTTTGACGAC
CAGATCAAGCGGTACGGTCGCAACTACCTCGTCAACCTCGTCAACCAGAAGGGCTACGAG
CTGCCTGTCAAGCGGGCCTACGAGCAGCTGGTCGACCAGCTCGGCTACCCCGAGGACCAG
GTCTCGTACGTCTACTTTGACTTCCACCACGAGTGCTCCAAGATGCGATGGCACCGTGTC
CTGTTGCTGATTGAGCGGCTGCAGGAGCTGGGTCTCGACCAGCAGGGCTACTTTGAGGCT
ACCCTCATGCCCAACCGTCAGCTGCAGCCCCAGGCTAACCAGACCTCCGTCGTGCGAACC
AACTGCATGGACTGCCTGGACCGAACTAACGTGGTCCAGTCCACCTTGGGCCGATGGGTG
CTGCAGAAGCAGTTTGAGGCTGCCGGAATTCTGGCCCCCGGCCAGAAGTGGGAGACTACT
GAGCCCAAGTTCGAGCTCATCTTCCGAAACGTGTGGGCCGACAACGCCAATGCAGTGTCC
GTCACTTATTCTGGAACCGGTGCTCTCAAGACTGATTTCACCCGTCTGGGCAAGCGAACC
AAACAGGGCGCTCTCAACGACGGTCTCAACTCCGCCACCCGATACATCAAGAACAACTTC
CAGGACGGCATTCGTCAGGACTCTTTCGACCTGTTCCTGGGCAACTACGTGCCCTACTCG
GGCCGACCTGCCCGCTTCTACGACGTGCGCCCCATTCTGTTCCAGGCCGTGCCCTACATG
GTTCTGTCTGCCGTGGTGCTCATTCTCTGTGCCACCTTCTTCCCCCGACAGGATCTGTCT
GCTCTGGTGAGCCGATCATTTGTGGGCTTCTGGGTGCTGGTACTGGTGTGGTCGGTGCGA
TACATGACCAAGAACGGTCTGCAGTTTGTCAACTGGCCCAAGCTCATCAAGCCCGACTTT
GTGTCTGAAAACGAGATTGTCAACAACGGCAAGGTCTCTGGTATTGTCTACAAGGTGGGA
GACAGCGACCGGGTCAACAAGCTGGATTAGAGAACGGCTAGATATATATCATGTTAACGA
ATCGAATAAAAGACATCATTGAATACTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05995g_CDS-001

Protein length: 610 aa.
Product: Phosphatidylinositol phosphate (PtdInsP) phosphatase, putative
Gene: SAC1

>YALI0D05995g_CDS-001 MKYAEDHNGYYFQLPGEKTSLTIAKGSGAIAANEGVVAPGGKEIAAIVGTIRLLASQYII
VASKTETVGAIFGQQVHRVTAFDILPINGGSADPQEQQYLKILQFHLDSSRLYFCRTWDL
TTSLQAQSHAQRAPGVSFETADERFFWNKYVCTDLIDAARTQPGVALFVTPMSFGFVELS
QSTINGRSITFGVITRRSRHRAGTRYFRRGIDAHGNVANFNETEQLLIVEGTAEPPRVFS
YLQTRGSVPVYWGEVINLKYKPNLQIGQPATDAAKLHFDDQIKRYGRNYLVNLVNQKGYE
LPVKRAYEQLVDQLGYPEDQVSYVYFDFHHECSKMRWHRVLLLIERLQELGLDQQGYFEA
TLMPNRQLQPQANQTSVVRTNCMDCLDRTNVVQSTLGRWVLQKQFEAAGILAPGQKWETT
EPKFELIFRNVWADNANAVSVTYSGTGALKTDFTRLGKRTKQGALNDGLNSATRYIKNNF
QDGIRQDSFDLFLGNYVPYSGRPARFYDVRPILFQAVPYMVLSAVVLILCATFFPRQDLS
ALVSRSFVGFWVLVLVWSVRYMTKNGLQFVNWPKLIKPDFVSENEIVNNGKVSGIVYKVG
DSDRVNKLD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG