| Description | Ylli, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli |
|---|---|
| Locus type | mobile_element |
| Gene names | Ylli, Ylli_pol |
| Locus tag | YALI0D05973t |
| Pseudogene | This locus may contain pseudogene(s) |
| Species | Yarrowia lipolytica | Positions | 758790..765294 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0D | Total length | 6505 (nuc.) |
| Previous locus | YALI0D05929g | Next locus | YALI0D05995g |
Here is a representation of the structure of the locus YALI0D05973t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D05973t
AATCGAGCGCGACCAGAAAAAACGTTCACCATGGAAACAGCGCAAGCCCAAGCTTCGGCG
GGTAACTCCTTGGGCGCTCCGAACCACCCACCTCCTGATTTATCGCGAGGTGATGGAGCC
ACCTCAACCGAAACCCCCAACCAAACCGACATTGAAAAAATCCAAAAAAACGACAAAAAC
GATGAAAACAACAAAAAAAACGACAAAAACGACAAAAACGACAAAAAAAACGACAACAAT
ATCACCCTCAACGCCTGGAAGAGCAAGGCCGAAGTCAAGGCTCTCCTGACATCGAACCCC
TCCACACTCAAATTCAACCTCAACAAGGAGCGAATTTCGGAGCCCCTTGCGGCGCCGAAT
GGTAGGCATACCTCCGGCCGTTTCAACGTGTCCTATGTAGCCAGCAAGGAAAACTTCTTC
CGAAGAGCTCTTGACCGCTCCGCCACCCCTGATTGGAATCTTCCTATCTCCATGTTCCTC
GAGCACCTCGATAACGCCGCTGAAGTCGACGAGAAGGACACCATCAGTGTCCTCGAGGGC
GTCATCGAAAAGTTCGACGAGATCAAGGGTCAGGTTGGTCTGGCGGAGTTTGACCTGTCC
AGGCACAACCTAGACATCGTCCCCCACCTGATCGACCAGACTAACTTAGAACAGGACCCT
GAAGACTGCTACCAAGTGGGAAATGGTTGGCACTACCTGACGTCGGACGCCCTCACCGAC
CCCCACGAACAACGAATGGCTGTCATTCTGGAGACAGTTAGTCTCATTGTTGAGGCCAAT
ACTCAAGATTATCGCATCATGAGGAAGGGCTCGGCTAACCCTGCTGGACGAAGAGTACTT
TACTACTTCAACCTACCCTCGTACATGAAGATGGAGCGTCAGACGGAGGATGCTTTCAAG
ATCCACCTCAACGCTATTCTCAACCAGTTCGACGTAGACATTGATCAGGCCATTCCAGGT
TCCTCCCTCTTGAGTGGCACCCTTCTGATGACCTCTGCCAACCATCAGAACATCTCGGGT
CCTGTGATCGCAGTTCGTGCTCTCCTAGGCTCCACCCTGCCCCAGACCATCCCCGACTTC
TTCGTCAACCTGGATCCCACCAAGGCTAGGCTTACCGGCTCAAAGTTGATCAAGATGCAC
TTCGCCAACGGCGATAACATCTGTGTTAAGTGCAAGAGCACTAAGCACATCCGGGAGGCC
TGCCCCGAGAAAGACATGGTCACTCCCAAGATCTTCCGCACCCGCGCTCACCAGGGTACC
CTCCCACAGAGAGGTAAAGCCCTTGCTTCCATCCATGCCCCATCCACCGTGGAGCCCCCG
GTCCAAACTCGCAAGTTCCACCACACGCCTGCTACTCACCAGTGGGAGACCGTCGGCACT
AAGTCCCCTAGACATAGACGGACTCGAGACACGTCCCCCCAACCCACCGGTCAAAAGCCC
CTCCGATCTTACTACAACTTTGAAGTCTTGAGCGACAAAACCGGAGAGGACACACCCGAA
GAGACCGAGCAAACTAACCAGCTGCCCTCTACGAACCAGCAGCATGGAACTCAGAATCTA
CCCATCAACATCCCCGCCTCCGAGGAAGACACAGTTCCCGACGACCAGGAAACGGAACCG
GCTGACGTATCCATGAACGGCTTTGACACCCAGCCTGACGCACTTGCTCACCCTGAAGTA
GCCCCTGATGTCACCCAGTTTCTTCCCCCCGCTACCCCGCTTAACACCGAGGCCACCAAC
AACGGCCTTCCCCACGACCACACCAGTCCCAACACGACCAACCAAACACAACCCCCCCCC
CCGGAAGTATCCACGAGGGCCGACCCCGAGGAGGGCACACCACCTCCAGTTTCTCTGGCG
AGCCCTCTCACACCACGCTCGGCAAGAAGCACATTGCGGTCTTCCAGACCGCCTCGAGCG
AGGTTCCGGTGCAAATCCTGAACCCGGACAGGTCGGAGAACAGACTCTGCTGGCTGCCTT
CTCAGGAGGTAGCAAAGTTCATTGACGGGAGGTGCCCGACATTCCTGTCTACATGCCACT
TCAAAGTTTTCCACGACGGTGCGACACTCAGCTCGGTAGACGAGATTGTAGAACCCCCGA
ACAGTCCCCCGAACCCCCCTAGGGTGACCACTCTCCATGAGGTGGACACAATGCTCCGAC
CGGGGCAGAACCAGTAAGCATGTCTTTCACCTCTACTACCACCCCTTCTAAAGCCCCATG
TAAGAGCACCCAGGCCAAAATGAAATCTCCGAATGTTAAAGTCATCACGGCTAACATCGG
CGGTTTTAAGATGGCGGAAGCGCTTAACCGATTACCCGACACCATTGTAAACATTATTCG
AACTACTCACTACCCCGATCTCGTCCTTCTTCAAGAGACGAACTGGGTGGACTCCTCCCT
ACAAACCGCTCAACAAATCATTTCAAACTCGCCCTACCCGGGGGGCAGACACTACACCCT
CCTCGGCTCCACAGCTGGTGTTTCTAATAGAAGCGTCGGCGTGGGGCTAGTCTATTCCGA
CAACGTCACCATCACAAACTTTACAACAGTTTTTGAATACTTCCCAGCCCTAGACAACAG
ACTGTGTTTGGCCGACGTGCACATCAAAGGCACCGACAGACACCTATCGCTGATCAACGT
ATACGCACCAAACGAGCAGGGAGCCTCCCCCTTCACTAACCGGCAGTTCTACCAGTCACT
AGACGACTATCTACGCCTCCATCCCTGCCAATACCCCCTGATAGCGGCAGGCGATTGGAA
CGCGGTCGCCTCCAACGACGGCAGGATTGGCGAAAAAGTGACGACTCACCTTAAGGACTT
CTTAGCTAACTGGGACTTACTAGACACCTACACTCTAATCAGCAAACACAGAAAAGGCCT
CTACACTCACACCAACAACAGCCGCGGAGCTGGCAGGCGCCTGGATCAGCTGCACATCTC
TTCGACACTCTCACAGTGGATCAAATCCACACAACTGGTAACCAACAAGCAGGGTCACAA
CATCACGAAGTCCTCTCACCACGCGGTCCAATTCGTCTTTAACTTTGGCAACCTCACCCA
GCGACAAGACAGAGGCCCAGGCACCTGGAGGATGCCCTGGTGGGTTTTTGATACAGAGTA
CATTGCTTGGCTCAAGTTCCACGTCAAATCCATTCTGAAGCGATATGGTCCTTTGAAGCC
CAGCCTGAAGCTGCAATGCCTGAAAGAAAACATTAAGGTCACCATCCAACAGGAAGCCAA
AAACCGCGCACTTCGAGATTCCAACCACCCAGACAACAGACGCCGCGAGGCCCTCATGGC
AACAGCCTCAGACTGGCAAGCCTACCCAGCTAACGAGCCATACCCGATGCTCCATGCTCG
GGTCGAACAATCCAAGCAACAGATGGAGATCCACTCCCTACGGAACCACCAAGGCCGAGT
GAAGACCGACACCTCCTCTCTCTGCGACATCTCAGCTCGATACTTTGACAACATCTTCGA
CAGAGCTGCCGATATCAACGACACCGACGACAGCGCCTTTTTAGACCTCTTCCCCGAAGA
AACCCGGAGGGTGAATACAGCTAACCCAAGCCTGGACTCGTCTTTTACCAAGGAGGAGAT
CTTCGATACCATCAAGGCGTCTACGCACAACAGCGCGCCAGGGCCAGACGGCATCCCGTA
CAGGTTCTACCGCGACTGCTGGGATGAGCTGGGGGACTTGATGACGGACGTCTACAACGA
AGCTGGAGCCGACTCGCCCATCAGCACCGAACGCAACACCGCTATCATCAAACTACTGTA
CAAGTCGGGAGATCAGGCCGACATCTCCAACTACAGGCCTATTTCTTTGATCAACACAGA
GGTGAAGATCTACACACAGCTCATTAACAAAGCCATCCAGAACATTCTTCCGGACAGCAT
TCACGGCGCCCAAAACGGTTTCGTACCGGGTCGACACATCACTAACAATCTCGACACCAT
GGATCATTTTTGCAACGCCTACTCCCAGCTGAACATGGGTTGGGTCGTAGGATCACTGGA
CTTCCGGAAAGCCTACGACACTATCAGCCAGAGTTGGGTGATAAAGACGCTTCGAAATGT
GGGTGTCTCGGAACTGATGATCAACCGTATCCTAGCTGTACAACAGAACGCAGTAACGAG
AATCAACATCAGAGGTGTCCTATCTCGCCCAGTCCGCATCAAGATCGGAGTGAGACAAGG
ATGCCCTCTCTCTCCAACCCTCTTCATCATCGCAGTAGACGCACTTGTGCGTCGTCTGGA
CCGAGAGATGTTTGGACTGGCCCCAGGCCTGCCACTATCCCACCACCACACCACTGGGCA
CAGGCCGCCACAACCCCCTACTCACCCGGAGGCAGTGGCAGCTGGACACATGAAGGTGTC
GGCTTTCGCGGACGACATAGCGGTGTTCCTCAACAACATCCAGGACGTGGCCACGGTTGG
TAGAGTGCTCTGCCTCTTCCAACGGGTCTCAGGCCTCACACTAAACCCGTCAAAGACGGT
GCTTCAGAAGATCGGCCCCCCCGATTGTTTTGTTCCACTAACCTTTATTGACGCAGAATG
GCAGCGAACAATTGACGCCACCTGGCCAACCGACAACAACACACGACAGGCCCCGACGCT
CCGGACATCTGACAACATTTTCCGTTACCTCGGAGTACACTTCGGAAATCGCGAAAGGTT
GGACACGCACTACGCTCAGATCAAGGAGGACCTCAAGGAGTCGCTGCGACGCCTTTCACT
ATGGGGTCTCCCCTATTACAGCAAGGCGTGGATGATCAACATCTACTTCTTCTCGAAACT
GAATTTCCTTGGACCCTACGTCAGCCAGATCGACAACACCTTCATCCGAGAGCTGAACGA
ACTAGCGTGCGACAAGATCAACAAATTATCACCCGACAAAACACGCAAAACCTTCAGCAA
TGGTTTCATCCAAACTCCGGTAGGCAGAGGAGGACTGAACCTGCGGGACATGGGACGTTT
CATGGTGTGCCTGAAGGCCGCTCGGGCTTACAGGTTCTTCCATGGCTCATCGCCGGCCCT
TTGGGACTGCACCTTCCAGTTCTACAGCAGAACTCACAGTCTCACACAGGAAAAGCCACA
CCAGCGCGTCGACTGCCGCTTTCCGACAGGCCAAGCTTGGGGCTACGCAGCCTCCCCCAC
CATGCGAGACGCAATCAGAGCTTCTTTCGAGCTCAACAAGCCCCTCACCGCGGAACATGC
CAACCCTCGAGAAGATCACGAGCCCTCTACAACAGACACAGTTAATCACAGAATCTGGGA
ACGAAACCAGGTGAACGTGAGAGCAGCAGAATCTTTCCGGGAAGCGCACGTCGACATCGC
AGCCGCGAGACGATACCATCCGGTCAGAATGGTGTCCACAGCGGAAATCGACCACCTCCG
GTGGAGCATGGGACCACTTACTCTAAAGAACTTCATGTTTCACAAGACCTCGTCTCCCGA
CTTGCCAAACTTCCCACACACACTTGCACGACCGAAGAAGTGGACTCAACGAAGCGACTA
CGGGGGCATCGCTGACGACATGGTCTGGCAGGAGGTAATGCATGACCTTCGAAAACACTA
CATCGCCGACGCCAACAAAGCACAAGTTCTTCACCTCATGCGGATATCTCGACTTCCGCT
CGTGAAATGGAGATACCCTGACGACCACGTTTTCACCAAGAAGAATCCAGGATGCGGGCT
CTGTGATAAGGCCATCATTCAGGATCTGCACGAGCATATCTTCTGCAAGTGCGAAGTTCT
TCTTTCCATGTTGACCAGGATGAAGATTCCGTCAGTGGACTCTCTAAAGGACTGGATCTT
TACCGAGTCGAAATGTGGAGTACTCCCCTCTTTCCCAGGGCATGTGAACAGTGACGCCCC
CCGGAAACATCAACAAGTCAAGACACGCAAATATCTGCGGGAATTGGCTTATGGGATCTG
GAAGATGGAGAGATCCCTCCGGTACTCAGGGGACGACGCCACCCTGGGACATGTCCAACA
GGGTTTGCTTCAATTCCTGAAGGAAGCCCAGATGTGTTTCTACGATGGACAACCGCCAGC
ACTTCACGATGAGCGAGAGTAGCGACAGTAGCAAGCGTAAAAGGCGGCCGAGGCCACCGA
GAGAACAGCGTAGCAGGGCGCGTAGTCACCACAGGGGACGCAGAACCAAACCAATGACGA
AGAAGAACCACAAGGAGACGTTTTCAAAGGCAATGCAAACGAAGAGGGCAATGGAAGGAT
TGAGATTAGAGAACTGGAGACTGGAGTGGCGTTTTCCCGATGAACGAACAAACACGCGAA
GCTATGTGGACCAACATACAACACGGACTGAACCAGGTTTTTTTATGATTTTTTTACTGG
AAATAGGTACGTGCCAAGTTGGACCATGACACTAAACGTGTTTAATTAGTAATATTCGTG
TAAGCGTACATTCATTTCAAAGGTTATTCTTTCACAGCAAAGTTATAATTAAATGAATGT
TTATGCAGAAAAAAAAAAAAAAAAA
Locus sequence
Up/downstream sequence
Protein length: 715 aa.
Gene: Ylli
Protein length: 1301 aa.
Gene: Ylli_pol
Browse the locus neighborhood with JBrowse:
ATG